Gene Tcr_0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0607 
Symbol 
ID3762471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp682764 
End bp683642 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content42% 
IMG OID637785320 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_390877 
Protein GI78484952 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.7356 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTATA AAAAATTAAC AAAAGCCGTT ATTCCGGTGG CAGGGTTGGG CACCCGCTTT 
TTGCCAGCAA CAAAAGCCAT TCCGAAGGAA ATGTTAACGG TCGTAGATAA GCCTTTAATT
CAATATATTA TTCACGAAGC GGCTGAAGCC GGAATTACCG ACATTATTCT GGTGACTCAT
TCAAGCAAAG GGGCAATTGA AAATCACTTT GATAAGCATT ATGAGTTGGA AGCGGAGTTA
GAAATTAGAG GTAAAAAGGA TCGCCTTGAA TCTTTGAAAG AGATTACGCC AAAAGGTGTT
CGAATTGTCA GTGTGCGCCA GCCTGAAGCT TTGGGGCTAG GCCATGCTAT TTTATGTGCC
TCCCCGATTA TAGCCGATAA CGAGCCGTTC GCAGTTTTGT TACCGGATGT GTTGATGCAT
CATTCAGTCA AAGGCTGTTT GGCTCAGATG ACAGAGCAGT ATCGAAAAAT GCATACTAGT
GTGGTGGCGT TGGAAGCGGT GCCCGATGAC CAGGTTGAAA AATATGGTAT TGCTGCTGTA
AAAGGCCCCG ATCTTAGAAT TGTTGAACTG GTAGAGAAGC CAAAACCAGC GGATGCGCCT
TCCAATCTGT CTGTTGTTGG GCGGTATATT TTTACGCCAA GATTGATGGA AATATTAAAA
ACCACTAAGC CAGGAGCTGG TGGTGAGATT CAGCTTACTG ATGCGATGGA CGAGTTGTTG
AATGAGGAAG TCATGTTTGG TTTCGAATTT AAAAATGGCC ATACATATGA TTGTGGTGAC
AAGTTAGGCT ATCTACAAGC AAATGTTGAA TACGCATTAA GAGATAAAAC TTTGGGGAAA
GGGTTTAAAG CTTACTTAAA ATCGTTGAAG TTAAGTTGA
 
Protein sequence
MSYKKLTKAV IPVAGLGTRF LPATKAIPKE MLTVVDKPLI QYIIHEAAEA GITDIILVTH 
SSKGAIENHF DKHYELEAEL EIRGKKDRLE SLKEITPKGV RIVSVRQPEA LGLGHAILCA
SPIIADNEPF AVLLPDVLMH HSVKGCLAQM TEQYRKMHTS VVALEAVPDD QVEKYGIAAV
KGPDLRIVEL VEKPKPADAP SNLSVVGRYI FTPRLMEILK TTKPGAGGEI QLTDAMDELL
NEEVMFGFEF KNGHTYDCGD KLGYLQANVE YALRDKTLGK GFKAYLKSLK LS