Gene Tcr_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0597 
Symbol 
ID3762461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp674002 
End bp674625 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content44% 
IMG OID637785310 
Productribonuclease T 
Protein accessionYP_390867 
Protein GI78484942 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0238382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA TCACCCATAT CAAAGAACGA TTCCGCGGCT TTCTACCTGT TGTTGTCGAT 
GTTGAAACAG CAGGCTTTGA CCCTCAAACC AATGCACTAA TCGAAATTGC CATCGTGACA 
TTAAAAATGA ATTCAGATGG CACAATCGAA CGCGATCAGA CAGTTCAAGC AAACGTCCTT 
CCTTTTAAAG GATCACAACT GGATAAAAGT GCTCTGAAAT TCATCGGCGT GGAAGACCCA 
ACCCACCCTT TTAGAATGGC CGTTTCTGAA AAAGACGCAT TGGAAAAATG CTTCGCACCC 
ATCAGGCAGC TTCTCAAGGA AACCGACTGC AGTCGAGCTA TCCTTGTGGG GCATAATGCC 
TTTTTTGATT TAAGTTTTGT GAAAGCGGCG GCGGATCGCT GCAAAGTCAA ATCGCCTTTT 
CATGAATTCA GCACGTTTGA CACCGTCTCT CTTGCTGGAC TGGCTTATGG CCAAACCGTA 
CTTGCAAAAG CGGTGCAAAT GGCTGAAATT GAATGGGATA ATAGCAAAGC GCATTCGGCT 
GAGTATGACA CTATTAAAAC AGCCGATTTG TTCTGTAAAA TCGTCAATCA GTGGCCAATC 
GAAAAAACGA GAACACTGCT TTAA
 
Protein sequence
MNKITHIKER FRGFLPVVVD VETAGFDPQT NALIEIAIVT LKMNSDGTIE RDQTVQANVL 
PFKGSQLDKS ALKFIGVEDP THPFRMAVSE KDALEKCFAP IRQLLKETDC SRAILVGHNA 
FFDLSFVKAA ADRCKVKSPF HEFSTFDTVS LAGLAYGQTV LAKAVQMAEI EWDNSKAHSA 
EYDTIKTADL FCKIVNQWPI EKTRTLL