Gene Tcr_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0592 
Symbol 
ID3762456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp669480 
End bp670430 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content46% 
IMG OID637785305 
Producthypothetical protein 
Protein accessionYP_390862 
Protein GI78484937 
COG category[F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase
[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID[TIGR00586] mutator mutT protein
[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAA GAATCGATAT CGCAATAGGC GTATTAAGAC AGGGTAACCG CGTTTTATTG 
GCCCAAAGAC AGGCAAAACA AAGCCATGCG TTGAAGTGGG AGTTTCCGGG CGGTAAAGTC 
GAAAAAGAAG AGCCGATTGA GGTTGCATTG GTACGAGAGT TTCAAGAGGA AGTCGGTGTT 
GAAACGACGC ATTGGCGCTC ATTGATTCAG ATTCCTTGGG ATTATGAGAC CGTCTCAGTG 
CATTTGCATG TTTATGAATC TGACCAGTTT CAAGGAGAGC CGCATGGAAA GGAAGGGCAA 
CCGGTGCAGT GGGTAGCCAT TTCAGAACTG AATGAATATG ATTTTCCTGA AGCCAATCAA 
GGCATTCTGA CGGCATTGCA GTTACCTGAG ACATTAATGA TTTCGGGTAG CTTTCATGAT 
GAGCAGGATG CATTGACTCG TTTAGAAGCG GCGCTGGACG AAGGGATTCG TTTAGTTCAG 
CTGCGTGCTA AGCAAATGGA GGAGGTGGCG TTTAAAACAT TGGCTAAGAA GGCCATTACA 
CTGACACATC GTTATGAAGG CGGCAAGATT TTAATCAATG GTAAACCAGA TTGGCTGGAA 
GTCTTGCCAG AAGCAGATGG GCTGCAACTG GCCTCTAGCA TGATTATGGA TTTGACAAAA 
AGACCTGTTT CAGAAAATAA AATTTTAAGT ATCTCGACCC ATTCTAAAGC AGAAGTAGCG 
AAAGCATTGG AGTTGAATGC CGACTTGTTG CTGCTCTCTC CGGTGAAAGA AACTCGCTCT 
CATCCGGATA TGAGTGGAAT GGGCTGGAAA ACGTTTGCAG ACATGGTGGC CGATATTCCT 
GTTCCGGTAT ATGCCTTGGG CGGAATGAAA CTGTCAGATG TAAAAGAATC TAGAAAACAT 
GGCGCTCAAG GAATTGCCGC TATTTCTGGG TTGTGGCCTG ATCCGATCTA A
 
Protein sequence
MSQRIDIAIG VLRQGNRVLL AQRQAKQSHA LKWEFPGGKV EKEEPIEVAL VREFQEEVGV 
ETTHWRSLIQ IPWDYETVSV HLHVYESDQF QGEPHGKEGQ PVQWVAISEL NEYDFPEANQ 
GILTALQLPE TLMISGSFHD EQDALTRLEA ALDEGIRLVQ LRAKQMEEVA FKTLAKKAIT 
LTHRYEGGKI LINGKPDWLE VLPEADGLQL ASSMIMDLTK RPVSENKILS ISTHSKAEVA 
KALELNADLL LLSPVKETRS HPDMSGMGWK TFADMVADIP VPVYALGGMK LSDVKESRKH 
GAQGIAAISG LWPDPI