| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0589 |
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| Symbol | |
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| ID | 3762453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 664152 |
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| End bp | 666884 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637785302 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_390859 |
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| Protein GI | 78484934 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0760479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACTTA ATATTTTCAA AAAATTATTT GGTAGTCGTA ATGAACGACT GCTTAAACAA
TACCGTAAAA ATGTTCAACA AATTAATGCG TTAGAAGAAG CTTTTTCTCA GCTTTCCGAT
GATGAACTGA AAGCGAAAAC CGATTATTTT AAAAGCCAGA TTTCTGAAGG GATCTCATTA
GATCGGATTT TACCTGAAGC ATTTGCGGTG GTGAGAGAAG CCGGTAAAAG AGTCATGGGG
ATGCGCCATT ACGATACCCA GTTAATTGGG GGGATGGTAC TGCATGAAGG TAAGATTTCT
GAAATGCGCA CAGGGGAAGG TAAAACCTTG GTGGCTACGT TGCCCGCTTA TTTGAATGCA
TTATCGGGTA ATGGTGTGCA CGTCATTACC GTCAATGATT ATTTGGCGGC TCGTGATGCG
GAATGGATGG GGCAGTTATA TGGCTTTCTA GGATTAACCA CCGGGGTTGT ACTGTCGGGT
CAGACCAGTA ATGAGAAACA GACGGCTTAT AACGCTGACA TTACGTACGG AACCAATAAT
GAATTTGGCT TTGATTATCT TCGTGACAAT ATGGCTATTT TTGCTGAAGA GCGAGTTATG
CGAGGGCAGA ATTTTGCGAT TGTCGATGAA GTCGATTCTA TCCTGATTGA TGAAGCCAGA
ACGCCGCTCA TTATTTCCGG GCCTGCAGAA GATAAATCAG ATTTATATCA GAAAATGAAC
CCGCTGGTAA AGGGGTTGGA AAAAGGCGAA GAAGACCTTG AAACCAAAAC CTCTAGTGGT
GACTACACGA TTGATGAAAA ATCGAAGCAA ATTCATTTGA CCGATGAGGG GCATTCAAAA
GTTGAAGCCA TGTTGGTTGA AGTTGGCTTG TTGGAAGAAG GTGATTCTCT TTACGACGCT
GAACACATCA GCTTGATGAA GTACGTGAAT GCTTCTTTAA GAGCGCATTT ATTGTTTGAA
AAGAATACTG ATTATATTGT TCAAGATAAC GAAGTTGTGA TCATCGATGA GTTTACCGGA
CGTAAAATGT CTGGCCGTCG TTGGGGTGAT GGATTGCATC AAGCTGTTGA AGCCAAAGAA
GGCGTTCCGA TCCAGGCGGA AAGTCAAACC TATGCTTCAA TTACATTCCA AAATTATTTT
AGACAGTATG CGAAATTGTC AGGGATGACC GGTACAGCGG ACACCGAAGC AGGTGAATTT
CTATCGACAT ACAGTCTGGA AGTGGTTGTC GTGCCGACCA ATAAAATACC TCAGAGAAAT
GACCTGCCGG ATCTGGTGTT TTTAGATATT GAAGGAAAGT TAGCGGCCAT TGTCCGTGAA
GTGAAAGAAG TCGTTAAAAC AGGACAGCCA ATTTTGGTTG GGACGGCCTC CATTGAGCTA
TCCGAAGTTC TGTCTTCTTT ATTTGAAAAA GAAGGTATTC CGCATAGTGT TTTGAATGCG
AAGCAGCATG AAAAAGAAGC CACAATTATT GCTCAAGCGG GTCGCCCAGG CGCCGTGACT
ATTGCAACGA ATATGGCGGG TCGAGGAACC GATATCGTGT TAGGGGGTAA CCTAGACATG
GAAATTGAGT CTTTGGATAA CCCAACAGAA GCGCAAATTG CACAAATCAA AGCCGATTGG
CAGATCAGAC ATGACGAGGT TGTTGAAAAA GGCGGGCTGA TGGTAATCGG ATCTGAAAGA
CATGAATCAC GTCGTATTGA TAATCAGCTC CGTGGTCGTT CCGGGCGTCA AGGTGATCCA
GGGGTAACGC GTTTTTACCT TTCCCTGGAT GATGACCTAA TGCGTCGTTT TGCTTCTGAA
AAAGTTAAGA ATATGATGCG TCGTCTGGGC ATGAAATCGG ATGAAGCCAT TGAGCATAAT
ATGGTGACTA AGTCGATTGA ACGAGCGCAG AAACAAGTTG AAAGAATGCA CCAGGATGAG
CGTGCTAACT TATTGAAATT CGATAATATT TCCAATGAGC AGCGCAAGGT GGTTTATGCT
CAGCGTAATG AGCTGATGGA AGAAGAAAAT GTGTCTGAAA TTATCGATGC TTTACGTGAA
AACGTCATTG AAACGATGAT GACCGGCTTT ATTCCGCCAG GCAGCATCGA AGAGCAATGG
AACGTGGCGG GTCTGGAAAA GCAGCTGCAG GAAGATCTAG GGTTAACCTT CCCAATTTCA
GATTGGTTGC AGGAAGATAA AGGATTGTTC GAAGAAAAAC TGCGTGAAAA AATTATCGCC
GAAGCTAAAG CGCTTTATCA AAACAAAATG GCGGTGATTG ATGAAAAAAC GCGTCATCAT
TTTGAAAAAG AAGTCTTACT TAGAACCATT GATAAGCAGT GGCGTGAACA CCTGAATGAA
ATGGATTATC TACGTCGCTG GATTCATTTG AAAGGGTTTG CTCAAAAAGA TCCTTTTCAG
GAATATCGTG CCACCGCGGC AGAAATGTTT GAAGCTTTTT TGGATGAAGT TATGTTCGAA
ACCGTTCAAA CGCTATCCAT GGTTCAAATC CAAGGGGCGG ATGATGTTGA TGCCTATGAA
CAGCAACAGA TTGAAGAGCG TCCACAAGAA TTGGAAGCCA ATCATCCGGC CGCAAAAGGA
ATTTCTGATG CGATGAACAA TGCAGCGTCT GACTCTGAAA CGGATTCATC CGATGCCACT
TATCGTCGTG AAACGCCGAA AGTTGGACGT AATGATCCTT GTCCTTGCGG TTCAGGAAAA
AAATATAAAC AATGTTGTGG TAAATTAAAT TAA
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| Protein sequence | MALNIFKKLF GSRNERLLKQ YRKNVQQINA LEEAFSQLSD DELKAKTDYF KSQISEGISL
DRILPEAFAV VREAGKRVMG MRHYDTQLIG GMVLHEGKIS EMRTGEGKTL VATLPAYLNA
LSGNGVHVIT VNDYLAARDA EWMGQLYGFL GLTTGVVLSG QTSNEKQTAY NADITYGTNN
EFGFDYLRDN MAIFAEERVM RGQNFAIVDE VDSILIDEAR TPLIISGPAE DKSDLYQKMN
PLVKGLEKGE EDLETKTSSG DYTIDEKSKQ IHLTDEGHSK VEAMLVEVGL LEEGDSLYDA
EHISLMKYVN ASLRAHLLFE KNTDYIVQDN EVVIIDEFTG RKMSGRRWGD GLHQAVEAKE
GVPIQAESQT YASITFQNYF RQYAKLSGMT GTADTEAGEF LSTYSLEVVV VPTNKIPQRN
DLPDLVFLDI EGKLAAIVRE VKEVVKTGQP ILVGTASIEL SEVLSSLFEK EGIPHSVLNA
KQHEKEATII AQAGRPGAVT IATNMAGRGT DIVLGGNLDM EIESLDNPTE AQIAQIKADW
QIRHDEVVEK GGLMVIGSER HESRRIDNQL RGRSGRQGDP GVTRFYLSLD DDLMRRFASE
KVKNMMRRLG MKSDEAIEHN MVTKSIERAQ KQVERMHQDE RANLLKFDNI SNEQRKVVYA
QRNELMEEEN VSEIIDALRE NVIETMMTGF IPPGSIEEQW NVAGLEKQLQ EDLGLTFPIS
DWLQEDKGLF EEKLREKIIA EAKALYQNKM AVIDEKTRHH FEKEVLLRTI DKQWREHLNE
MDYLRRWIHL KGFAQKDPFQ EYRATAAEMF EAFLDEVMFE TVQTLSMVQI QGADDVDAYE
QQQIEERPQE LEANHPAAKG ISDAMNNAAS DSETDSSDAT YRRETPKVGR NDPCPCGSGK
KYKQCCGKLN
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