| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0585 |
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| Symbol | |
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| ID | 3762410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 659852 |
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| End bp | 660793 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637785298 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_390855 |
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| Protein GI | 78484930 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.034882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAAT CAAGTAACCA AACAAAAGAC CGTGTTCAAC GCTTAGGTAA AGTCGCCGTA
TTAATGGGCG GTGTAGCTGC AGAAAGAGAC GTTTCGCTCC GGAGCGGTGC CGAGGTGCTC
AAAGCGCTTA AATCTGAAGG GGTGGATGCG GTTGGCTGTG ATGTGACATC CGTTGCACAG
TTGGTCGAGA TTGCTCAAAA ATATGATCGA GCTTTTATTG CTTTGCATGG TCGTTGGGGA
GAAGATGGCG GTGTTCAAGC GGTATTAGAC TCTCTGGCGC TACCTTACAC CGGCAGCGGC
ATGACGGCTT CTGCTCTTGC CATGGATAAG CTTAGAACAA AGTGGCTTTG GAAGGGGGTT
GGTTTGCCGA CGCCGGCTTT TATCGTGGTG TCCCCTTCAA GGCCGCTGGA TGTTGAAACG
TTTGATTTAA CATTTCCTGT CATTGTGAAA CCGAGTCATG AAGGGTCCAG CATTGGAATG
CGCAAAGTAG ATACACTTGA TGCTTTACAG GAAGCGGTTG ATTTTGCCCA GCAATACGAT
TCAGAAATTT TAATTGAACA ATGGATCACT GGTCGGGAAT TTACTTGTGC TGTGCTGGAT
GGAGAAGCCC TGCCAATGAT TCAATTAAAA ACAGATCATG ATTTTTATGA TTTTGATGCG
AAGTATCAAT CAAATACCAC CGAGTATTTA TGTCCATGTG GTCTGGAAAT CGCAGAGGAA
AAAAGGATTC AGGCATTAGT GCTGCAAGCG TTTGATGCCG TCGGTGCACG ACACTGGGGA
CGAGTGGACT TAATGTTGGA CGATCAGAAT CAACCGTGGT TGATCGAGAT TAATACCGTT
CCTGGTATGA CGGATCACAG TTTGGTGCCA ATGGCGGCTA AAGCCGTTGA TTTAAGTTTT
TCAAAACTGG TGTTAAAGTT AATATCCTTA ACACTACCTT AA
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| Protein sequence | MTQSSNQTKD RVQRLGKVAV LMGGVAAERD VSLRSGAEVL KALKSEGVDA VGCDVTSVAQ
LVEIAQKYDR AFIALHGRWG EDGGVQAVLD SLALPYTGSG MTASALAMDK LRTKWLWKGV
GLPTPAFIVV SPSRPLDVET FDLTFPVIVK PSHEGSSIGM RKVDTLDALQ EAVDFAQQYD
SEILIEQWIT GREFTCAVLD GEALPMIQLK TDHDFYDFDA KYQSNTTEYL CPCGLEIAEE
KRIQALVLQA FDAVGARHWG RVDLMLDDQN QPWLIEINTV PGMTDHSLVP MAAKAVDLSF
SKLVLKLISL TLP
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