| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0580 |
|---|
| Symbol | |
|---|
| ID | 3762405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 654487 |
|---|
| End bp | 655272 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637785293 |
|---|
| Product | FeS assembly ATPase SufC |
|---|
| Protein accession | YP_390850 |
|---|
| Protein GI | 78484925 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
|---|
| TIGRFAM ID | [TIGR01978] FeS assembly ATPase SufC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0529353 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATTAA AAGTTGAAAA TTTACACGCA CAAGTGGCTG AAGATGAAAG TAAGCAGATT
CTGAAAGGGC TCAATCTTGA AGTTAAGCCT GGTGAAGTGC ATGCCATTAT GGGACCGAAT
GGTGCGGGTA AAAGTACATT GTCCAGTGTT TTGGCCGGTC GTGAAGACTA TGAAGTGACC
GAAGGGAGTG CGATTTTTAA TGGTGAGGAT TTATTAGAAC TTGATCCAGA AGATCGTGCA
CGTAAAGGGG TTTTTCTCGC GTTTCAATAT CCGGTTGAAA TCCCAGGTGT GAGTAATAAG
TTATTTATGC AAACAGCCGT GAATGCGATT CGTGAGGAAA ACGGGCTTCC GGTTCTTGAT
ATGTTTGATT TTGATGAATA TGCTCAAGCC AAAATTGACT TGTTGAACAT GCGTAAAGAC
TTGTTGGATC GATCTGTGAA CGTCGGTTTT TCCGGTGGGG AAAAGAAGCG TAATGACATT
TTTCAAATGG CGCTATTAGA ACCAAAACTG TGTATTTTGG ATGAAACAGA TTCCGGACTG
GATATTGATG CCATGAAGGT GGTGGCAAAT GGCGTGAACT CTCTAAGAAC AAAAGACAGA
AGTTTCATCG TGGTAACGCA TTACCAGCGC CTGCTTGATT ACATCAAGCC CGATTATGTA
CATGTTTTAT ATGATGGGAA AATTATCAAA TCAGGTGGTT TTGAGCTGGT TCATGAGCTT
GAAGAGAAAG GATATGACGA TATTATCCAG GCACACGATG ATACAACCCA AACAAATTCT
AAATAG
|
|---|
| Protein sequence | MLLKVENLHA QVAEDESKQI LKGLNLEVKP GEVHAIMGPN GAGKSTLSSV LAGREDYEVT
EGSAIFNGED LLELDPEDRA RKGVFLAFQY PVEIPGVSNK LFMQTAVNAI REENGLPVLD
MFDFDEYAQA KIDLLNMRKD LLDRSVNVGF SGGEKKRNDI FQMALLEPKL CILDETDSGL
DIDAMKVVAN GVNSLRTKDR SFIVVTHYQR LLDYIKPDYV HVLYDGKIIK SGGFELVHEL
EEKGYDDIIQ AHDDTTQTNS K
|
|---|
| |