Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0576 |
Symbol | |
ID | 3762401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 650252 |
End bp | 651028 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637785289 |
Product | ABC transporter related |
Protein accession | YP_390846 |
Protein GI | 78484921 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.925588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACAT CGCCCTTAAT CACAGCAAAA AATATCAATC ATGCGTACGG TAACAAAACC GTTCTTAACG ATATTTCTTT AACGCTTCAT TCGAATGAAA TCGTCACGCT TATCGGCCCA AACGGGGCTG GAAAATCGAC TTTGTTAAAA ATTCTATTAA ACCTGATCCA ACCGACATCC GGAGAAGTCA CGCGTAAAAC AGGGTTGCGT ATTGGCTTTA TGCCTCAAAA AATACAAGTA GATGCATCCA TGCCTTTAAG CGTACAGCGC TTTTTAGAAC TCGGCTTAGC ACGCCAATCT CAAACCCTGT TTAATAAAAA AACGAATGAT ACCACAGAGC TCCATGAAGT CATTAACGAC TTAAAGCTAA ACGATTTATT AACGCACCCC ATTCAACAGG TTTCAGGTGG CGAGATGCAG CGTATTTTGC TGGCCAGAGC CTTACTTAGA AACCCTGAAC TTTTAATTTT AGATGAACCT GTCCAAGGTG TTGACTTACA AGGACAAACC GAACTTTACC ATTATATCAG CGAGATTCGA GATAAATACG GGTGTGGCAT TTTAATGGTC AGCCATGACT TACACATTGT CATGAGAAGC ACCAATAAGG TTTTGTGTTT AAACCAACAT TTATGTTGCT CTGGGCTGCC ACAAACGGTC TCTGGAAGTC CGGCTTTTCA AGAACTATTT GGTCAAGGTT TTGAAGAAGT TGCCTTTTAC GAGCACCATC ATGATGATCG CGTTTGCACA CACACACATG GACACACAGA GACATGA
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Protein sequence | MTTSPLITAK NINHAYGNKT VLNDISLTLH SNEIVTLIGP NGAGKSTLLK ILLNLIQPTS GEVTRKTGLR IGFMPQKIQV DASMPLSVQR FLELGLARQS QTLFNKKTND TTELHEVIND LKLNDLLTHP IQQVSGGEMQ RILLARALLR NPELLILDEP VQGVDLQGQT ELYHYISEIR DKYGCGILMV SHDLHIVMRS TNKVLCLNQH LCCSGLPQTV SGSPAFQELF GQGFEEVAFY EHHHDDRVCT HTHGHTET
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