Gene Tcr_0572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0572 
Symbol 
ID3762397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp645385 
End bp646218 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content44% 
IMG OID637785285 
Productthymidylate synthase 
Protein accessionYP_390842 
Protein GI78484917 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0207] Thymidylate synthase 
TIGRFAM ID[TIGR03284] thymidylate synthase 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAT ATCTTGACTT ACTGAAACAT ATTACCGAAA CCGGTGTCGC AAAAGGTGAC 
CGGACAGGCA CGGGAACACG CTCGGTTTTT GGGTATCAGA TGCGGTTTAA TTTAGAAGAA
GGGTTTCCTT TGGTAACGAC CAAAAAACTT CATCTGAAAT CGATTGTGTA TGAACTGCTT
TGGTTTTTGA ATGGAGATAC CAATAATCAG TATTTAAAAG AGCATGGCGT ACGTATTTGG
GACGAGTGGG CTACTGAAAC CGGTGATTTG GGACCGATTT ACGGTAGGCA GTGGGTGGCC
TGGGAAAAGC CAAATGGCGA CACCATTAAT CAGATTGAAG AAGTGATTCA GACGTTAAAA
AAGAATCCGA ATAGTCGTCG TATGCTGGTA TCTGCTTGGA ACCCTGCCGA TTTACCGGAT
GAATCCATGA GTCCGCAAGA AAATGTTAAG CAAGGCAGAA TGGCGCTTGC AACCTGCCAC
GCCTTCTTCC AGTTTTATGT TGCCAATGGC AAGTTATCTT GTCAACTTTA TCAGCGCAGT
GCCGATACGT TTTTAGGCGT GCCTTTCAAT ATCGCCAGTT ATGCATTATT AACGCACATG
ATTGCACAGC AAACAGATTT AGAGGTTGGG GAGTTTGTTT GGACAGGGGG GGATGTTCAT
TTATATAACA ACACGCTGGA GCAAGCTGAA CTGCAAATGT CTCGCACGCC TTATGCCCTA
CCAAAGTTAA AAATCAAACG AAAGCCACCA TCGATTTTTG ACTATGAGTT TGACGACTTT
GAAATTGAAG GGTATGAATC TCATCCGCAC ATCAAAGCGG TGGTTTCGGT ATGA
 
Protein sequence
MKQYLDLLKH ITETGVAKGD RTGTGTRSVF GYQMRFNLEE GFPLVTTKKL HLKSIVYELL 
WFLNGDTNNQ YLKEHGVRIW DEWATETGDL GPIYGRQWVA WEKPNGDTIN QIEEVIQTLK
KNPNSRRMLV SAWNPADLPD ESMSPQENVK QGRMALATCH AFFQFYVANG KLSCQLYQRS
ADTFLGVPFN IASYALLTHM IAQQTDLEVG EFVWTGGDVH LYNNTLEQAE LQMSRTPYAL
PKLKIKRKPP SIFDYEFDDF EIEGYESHPH IKAVVSV