Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0564 |
Symbol | |
ID | 3762385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 635049 |
End bp | 636473 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637785277 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
Protein accession | YP_390834 |
Protein GI | 78484909 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATGGA ATTTAGCCGA TCTTGTTGAG GCCGTAAACG GAGTATTGGC GGGTGAGTTA TTGGGCGATG AGCCGGTGGT TTTTACATCG GTCAGTACGG ATACGCGCAC GTTAAAATCC GGTGCATTGT ATATCGCAAT TAAAGGCGAG CACTTTGATG GTCATGCCTT TATCGGAGAA GCGGTTCGGC AGGGTGCCGT TGCGGTTTTA ATATCCGAAC CGATGGAAAC GGTTGTGCCT GCGGTTTTAG TGGACGATAC CCGCATTGCT TTTGGTCAAT TTGCCGCTTG GCATCGTCAA CAAATGTCGT TAAAAGGATT GGTTGGGGTG ACGGGTTCTA ATGGCAAAAC GACTACAAAA GCACTACTTG CACACATATT ATCCAAGCAG GCTCAGGTTC TCTCAACGCA AGGGAACTTA AACAATGATT ATGGCTTGCC TCGCACCTTA CTGGAGCTGT CAACATCGGA TGATTATGCG GTAATTGAAA TGGGCGCTAA TCATGTCAAA GAGATTGCGT ACCTCACCCA AATTGCCAAG CCGGATGTTG CGGTCATTAC ATTGGCAGCG GGCGCGCATC TGGAAGGGTT TGGTTCTCTG GAAGGCGTGA TTGAAACTAA AGGTGAAATT CTGGACGGTG TTTGTGAAGG CGGCAAAGCC GTTTTAAACA CCGATTCCCC TGGGTTTGAA TATTGGATCG AAAAAAGTCA ACAGCTAGGG CTGTCAGTAA TCACGTTTGG ACAGGCTCGT TTTGCCAATG TACAAGTAAC CGATTTTACA CAGGCTGAAA ACCAAATTAC ATTTACACTT GATTTGAATT GGCAGAACAT ACGCCAAGCG GAAGTGGTGA CGATGCCTGT GCTTGGATTT CATAATGCAA TGAATGCCGC CGCTGCGACG GCTGCGTGTT TAGCGTTAGG GTTGTCATGG TCGGAGATTT ACCCAGGCCT GGGCGATTTT GATGGTGTTG CAGGACGATT ACAACAATCG AAATTACCCC AAGGGCTTTT GATTGATGAC AGCTATAACG CGAATCCTTC TTCTGTCAAA GCGGCGATTG ATGCGCTGGT CCAGTTACCG GGACCATCAG CCGTTTGTTT AGGAGGCATG GCGGAACTTG GCGCAGAATC AGAGGCATTG CATCAGGACG TTGCCGCTTT TGCGAAAGCG AAAGGGGTGA CGCACTTATT GCTGTTCGGT GAGGCAACAC AATGCATGCC AACCGTCTTT GGAGAAGGGG CTAAGTGGTT TGAGTCTCAC GAGGCCTTGG CTCAGGAAGC CGTCGATTTA ATCCAACAGG ATAAAATACA AAACGTATTA GTGAAAGGCT CCCGTTCGGC CAAAATGGAA CAGGTCAGCC AAAAAGTGTT AGCCAGATTG GAAGCGAACT CTTCTTCCAG CAATCACCAC AATAACCGAG GATAA
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Protein sequence | MTWNLADLVE AVNGVLAGEL LGDEPVVFTS VSTDTRTLKS GALYIAIKGE HFDGHAFIGE AVRQGAVAVL ISEPMETVVP AVLVDDTRIA FGQFAAWHRQ QMSLKGLVGV TGSNGKTTTK ALLAHILSKQ AQVLSTQGNL NNDYGLPRTL LELSTSDDYA VIEMGANHVK EIAYLTQIAK PDVAVITLAA GAHLEGFGSL EGVIETKGEI LDGVCEGGKA VLNTDSPGFE YWIEKSQQLG LSVITFGQAR FANVQVTDFT QAENQITFTL DLNWQNIRQA EVVTMPVLGF HNAMNAAAAT AACLALGLSW SEIYPGLGDF DGVAGRLQQS KLPQGLLIDD SYNANPSSVK AAIDALVQLP GPSAVCLGGM AELGAESEAL HQDVAAFAKA KGVTHLLLFG EATQCMPTVF GEGAKWFESH EALAQEAVDL IQQDKIQNVL VKGSRSAKME QVSQKVLARL EANSSSSNHH NNRG
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