| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0554 |
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| Symbol | |
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| ID | 3762374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 622019 |
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| End bp | 624565 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637785267 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_390824 |
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| Protein GI | 78484899 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.164012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAT TGCCGATTCA TGCGCTGTTA CCTCAATTGC GACAGGGGTT AGACACACAT
TCTAATGTCA TTCTCCAAGC CGATCCGGGG GCGGGAAAAT CAACAGCTGT GCCATTGGCA
TTATTAGACT CAAGTTGGTT GGCTGGGCGC AAAATCATTA TGCTCGAGCC ACGTCGTTTG
GCGGTCAAGT CAATTGCGTA TTATCTGGCC AGCCAATTAG GCGAGCCAGT GGGGCAACGT
ATTGGTTATC AAATTCGTCA TGAACGAAAA GGTTCGTCAA ACACTGTTTT AGAAATTGTG
ACCGAAGGCG TTCTGACTCG TCGGCTGCAA GCTGACCCTG AACTGAACGA TGTTGCACTG
ATTATTTTTG ATGAATTTCA TGAACGCTCT CTTCAAGCCG ATCTTGCATT GGCGCTCTGT
TTAGAGGTGC AGTCGGCTTT AAGAGAGGAT TTAAAGCTTT TAATCATGTC TGCAACGATG
GATTTAACCC CGCTAAAAAC ATTATTTAAT CGAGCTACGA CTTCTGTATC CGTGTTGCAA
TCGGCCGGCC GTGTGTTTCC AGTTTCGGTC ACGTATCTGT CGTCTGCGTT AAAATCCTCG
CATCCTGCGG ACTGGATGCC AGCGTTGCAA GGATTGATCC GTAAAGCATT ATCGGAGACA
GAACAAGACA TTCTGGTCTT TTTGGCGGGT CAAAGCGATA TTCGAAGACT GCAAAAACAA
CTGGAGGATT CTTTGTCGGA AGATTTTGTT ATTCGCTGTT TGTTTGGGGG GTTGAGTCTG
GAAGAGCAAG AGTTGGCGTT GTTACCTGAT GCTCAAAAAC GACGAAAAAT CGTATTGTCC
ACGAACTTGG CGGAAACCAG TTTAACCATA GACGGCATCG GAGCTGTGGC GGACTCCGGA
TTTACGCGTA AAGCGTTATA TGATGTTTCA AGTGGTATGA CCACGCTCAC GACGCAACGC
ATTTCTCAAG CGTCTGCCGA ACAACGTAAA GGGCGTGCCG GTCGTTTATT TTCAGGCAAA
TGTTATCGTC TTTGGACGGA ATCGCAGCAA GCTCAATTAT TGCCTTTTGA AGAACCTGAG
ATCACGCAAA GTGACTTATC CGATGTGTGT TTAGAGCTGG CGCAATGGGG CGTGTCTTCG
CCGACCGAGT TAATGTGGTT GACTCCGCCT CCCGTACCGC ATTATGAAGC GGCAAAGACA
TTGTTGATTT CTTTGGGATT GTTATCTGAA GCGGGCGCTG TAACCGAGTT AGGTCAAAAA
AGCATCACGT TTGGTTTGCC GTCTCGGTTA GCTAAAATGT TATTGGTGGC CGAACAAGTT
ACGACATTGG ATAAAGGAAC GGCACAAGCA CTGGCATGTG ACGTGGCGGC TATTTTAGCG
GAAAGGGATG TGTTGTCTTT TTCAGAGGGG GCCGATTTAG TGAAGCGGCT TCTGGCTTTG
CAAGCCTATC GAGAGGATCG AAAGCAAGCC AGACGAACTT ATTCCATGCA ACTTTCGGCG
ATGACGCAGG CTTTAAAAAA TGCTGAAAAC TGGCTGAAGA GATTAGGGGG TGACGCCAAA
AACATGGCCT TATCACTGAC CGAATTGCAA CGGAATGCGG GGGCGTTGGT CGCAATGGCT
TACCCTGAGC GTTTGGCTCA AAAACGAAAA GGCCAAGGGG TTCGTTATGT GATGCGAAAT
GGAAAAGGGG TGTGTTTAAG GAAAGACGAT TCTTTGCAGT CGTCATCTTG GTTAGCGATT
GCCTCGGTGG ATGGTAAACG TCAAGAAGGA CAGGTTTATT TAGCGACGTC GATTACGTTA
GATACGATTA AACATTTATT TTCTAAACAG GTTGAGCACA AAAAAGCGTA TCGTTTTGAC
GAGGAGAAAA AAGAGATTTC AGGACGGGAG CAGACGTGTT TAGGGAAATT GCTGTTGGAC
GAAAAAGCAC TGTCAGCACC GGATCAGGAA GCGATTCAAT CATGTTTAAT GGCAGCGATT
GAAAAGGATT TGACTTTATT GTCTTGGCCT TCGAAAACGG TGGACTGGTT AAATCGTATT
CGTTGGCTTG CACAATATTG CGAAGAGGTT CCAGATTTTA GCCAGGCCTG GCTAAAATCA
AACATAGCAA CGTGGTTGTT ACCTTATTTG AATGAGGTTT CCAGTGTGAA AGCATTACAA
AAATTGGACG TATTCGCATT GTTGCAAGCC CAGTTACCTT ATGACGTGCA ACAGAGTTTA
GAGCAACAAG CACCGCGTTA TTATAAAACA CCGTCACAAA AATTGGTTCC AATTAATTAT
GAGAATCACC CGACGGTTTC AGTGGTCTTG CAAGAAGTTT TTGGGGAGTT AAGTTCGCCA
AAATTGGCTT GGGGGCAAGT GTCATTGACG TTTGAGCTGC TGTCACCTGC TCGCAGACCT
ATTCAGGTGA CGAGTGATTT AGCGAACTTT TGGCGAACGT CTTACTTTGA GGTAAAAAAA
GAAATGAAAG GCCGTTACCC GAAACATCGC TGGCCTGATG AACCACTGGC TGAAAAAGCC
GGCCACTCAG TGAAGCCGAG GTCATGA
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| Protein sequence | MKELPIHALL PQLRQGLDTH SNVILQADPG AGKSTAVPLA LLDSSWLAGR KIIMLEPRRL
AVKSIAYYLA SQLGEPVGQR IGYQIRHERK GSSNTVLEIV TEGVLTRRLQ ADPELNDVAL
IIFDEFHERS LQADLALALC LEVQSALRED LKLLIMSATM DLTPLKTLFN RATTSVSVLQ
SAGRVFPVSV TYLSSALKSS HPADWMPALQ GLIRKALSET EQDILVFLAG QSDIRRLQKQ
LEDSLSEDFV IRCLFGGLSL EEQELALLPD AQKRRKIVLS TNLAETSLTI DGIGAVADSG
FTRKALYDVS SGMTTLTTQR ISQASAEQRK GRAGRLFSGK CYRLWTESQQ AQLLPFEEPE
ITQSDLSDVC LELAQWGVSS PTELMWLTPP PVPHYEAAKT LLISLGLLSE AGAVTELGQK
SITFGLPSRL AKMLLVAEQV TTLDKGTAQA LACDVAAILA ERDVLSFSEG ADLVKRLLAL
QAYREDRKQA RRTYSMQLSA MTQALKNAEN WLKRLGGDAK NMALSLTELQ RNAGALVAMA
YPERLAQKRK GQGVRYVMRN GKGVCLRKDD SLQSSSWLAI ASVDGKRQEG QVYLATSITL
DTIKHLFSKQ VEHKKAYRFD EEKKEISGRE QTCLGKLLLD EKALSAPDQE AIQSCLMAAI
EKDLTLLSWP SKTVDWLNRI RWLAQYCEEV PDFSQAWLKS NIATWLLPYL NEVSSVKALQ
KLDVFALLQA QLPYDVQQSL EQQAPRYYKT PSQKLVPINY ENHPTVSVVL QEVFGELSSP
KLAWGQVSLT FELLSPARRP IQVTSDLANF WRTSYFEVKK EMKGRYPKHR WPDEPLAEKA
GHSVKPRS
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