| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0551 |
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| Symbol | |
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| ID | 3761598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 615159 |
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| End bp | 617630 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637785263 |
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| Product | hypothetical protein |
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| Protein accession | YP_390821 |
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| Protein GI | 78484896 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.454209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA CTTACCTTCG TGAGATGCTG ACCGCCTCAA AATGGTTTTT ACGTGGGATC
AAACGCGGCG ATTGGGTTTG GCTGTTATTG GCGGTGGTGA TTGCCAGTGC GACCGTCACC
TTTGTGGAAA AACTGGGTCA GACGGTGAAA CAAAGCATGG TGCGGCAAGC GGCCAATAAT
CTGGGAGCGG ATTATGTCAT TCGCAGCTCG CGGCCGATTG ATGTGCAATG GGTACAAAAA
GCACAGCAAC TTGGACTGGA GACGGCACAG GCGCAGAGTC TAATTACAAT GGCGTTAAGT
AATGAGCAGT TTCAGTTGGT GCGGTTAAGA GCCGTATCAC CGAATACGCC TTTGCGATCA
AAGACACAGT CTTTTCCACA CGTGTCCGGC ACCAATCAGG TATGGGCTGA ACAAAACCTG
GTGCCGATGC TGAACCTATC AAAAGGCAGT CAAGTCACTC TTGGGAAACA AACTTTTTCC
GTGGCGGGTC TGTTTCAACC TGCCAGCAGC GGTCTCGGTA TGGGGGCTTT TGCCTATCAA
ATGGTGATTC CCTTGTCACA GTTAGCCGCC ACCGAGTTGA AAGGGCCGGG AAGTCGTATT
GAGTATGAGC TTTCTGTTGC GGGGGAATCG AAAGCGATTA AAACGTTTGC CCAGCAAGTT
GAAAAAGCAC AAAACCCTCA CTTGCAGACA CTTTCAGCAC AAGCACCTTC GCAAGATTTG
GCAAAGTCGC TTGATACCGC GTGGTTATTT TTAGAGTTAG CCGCCTTGTC GGCTGTCATG
GTTGCCGGGT TATCCATTTT GATTGCCAGC CGATTTTATT TGCAACGTTG GCAGAATTCC
ATTGCCTTGA TGCGTGCCTT TGGTGCGCAA CGAGCGCAAA TGAGCCGATT GTTTGCTTTT
CAGTTAAGTT GGTTAGCGAT TTTAGGCAGT GGGGTTGGTG TTCTGCTTGG CATCGGTTTA
TTCCAATTTG TCATTCCGGT ATTACAGACG TATTTCAGCT CGCTTGTGAT TGCCGATTCC
GGCTGGGTGT ATCTGCATGG ATTCTTAATG GGCTTTTTGG TTTTATGGGG CTTTGCCTGG
CAAGCTTTTC GCAGTGCTGT ACAAACATCA CCGTTACAGT TGTTAAAGTC CGTCGATTCG
TCACCAAAAA TGAAGCAGTG GTTAATCAGT TTGGGCTTGG TGTTAGTGGT CGTCGTGTCA
ATGACCGGTT ATGTCTTTTG GGTCTTGATT GGCTTACTTG TTACCGGAGC GGTGCTGTAT
CTTGCTGCGG TTGGCTTGTT AAGGTTGGTA CGACTCTTAC AAGGTAAAAG CAAAGGCTGG
TTGAAGCTTT CTTTGGCCGC CTTATCAAAA GAGCCAGGAC TGGTTAAAAT TCAATTGATT
TCGATTGGGC TGGTGTTGTT TGTCTTGATG CTGATGACAT TTGTGCGTCA GGATTTAATG
CAAAACTGGC AAACCTCGTT GCCCAAAAAT ACACCGGATA CATTCCTCGT CAATGTTCAG
CCGGATCAAA AACAAACAGT GACAGAATTG TTAGCGCACC ATCACATAAA CGCCCCTTTG
GTTCCGATGG CCAGAGGGCG TTTAGTGGCG GTAAATGACA TGCCAATTAA GGCAAAAGAG
CAGGAAAGTG ACCGAGCACG TCGGTTATTG GAGCGCGAGT CTAATATCGC AGTGCTTTCA
ACCTTGCCTT CATACAATAC GCTTGAGCAA CAAGCTCAGC CCGAGTCACT TTCAGCTCAA
CAAAAAGCGC TGTTAACGGT TTCTGTTGAA GAGGGAATGG CTGAGTTGTT CGGGATACAG
TTGAACGATG TGCTGACCTT TAGTTTTACC GGGCAGGAAA AGCAATATCG TGTCGATTCG
ATTCGTCGAG TACAGTGGCA AAGCTTTCGC TTGAATTTCT TTTTTATTGT GCAACCCAGT
GTACAAAAAC CCTTACCGAT TTCGTATATC AGTAACTTTA CGTTAAGCGA TAAAGCGGTT
TCAGCAACCG AATTGACACA ACAGCTTGCG CAGCAGGCAT CGGGAGTGTT GTTGATTGAT
GCCAAGCGTA TTCTGACGCA AGTTCAAACC ATTATGGCCC AGGCCAGCTG GGCGGTAACG
GCGCTGTACG GGTTTACGTT GTTGGCCAGT TTGATTGTTT TATTTACCGC CACCATGGCA
AGTCAGCAAA CTCGTGTACA AAGCTGGTTG TTGTTGCGTA CCTTAGGAGC AACCCAAAAA
GAGATTGTTA AAATCGGTTT GATGGAGTTT GTGCTGTTAG GAGCCTTAGC CGGTTTATTG
GCCGCTGTTT TTGCTCAAAT CGCCAGCTGG GGAATTGGTT ATTTTGTGCT GGATATCCCA
TTGTCATTTA ACTTGATATT GTGGGTGACA AGCCTCATCA CCGGGATGTT GGTATTATTA
ATGATAGGAT GGGTCACACA AAAACGCTAT CTTAGACAGT CTCCGAGACG AATGGCACAA
AAGTGGTCGT AA
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| Protein sequence | MKNTYLREML TASKWFLRGI KRGDWVWLLL AVVIASATVT FVEKLGQTVK QSMVRQAANN
LGADYVIRSS RPIDVQWVQK AQQLGLETAQ AQSLITMALS NEQFQLVRLR AVSPNTPLRS
KTQSFPHVSG TNQVWAEQNL VPMLNLSKGS QVTLGKQTFS VAGLFQPASS GLGMGAFAYQ
MVIPLSQLAA TELKGPGSRI EYELSVAGES KAIKTFAQQV EKAQNPHLQT LSAQAPSQDL
AKSLDTAWLF LELAALSAVM VAGLSILIAS RFYLQRWQNS IALMRAFGAQ RAQMSRLFAF
QLSWLAILGS GVGVLLGIGL FQFVIPVLQT YFSSLVIADS GWVYLHGFLM GFLVLWGFAW
QAFRSAVQTS PLQLLKSVDS SPKMKQWLIS LGLVLVVVVS MTGYVFWVLI GLLVTGAVLY
LAAVGLLRLV RLLQGKSKGW LKLSLAALSK EPGLVKIQLI SIGLVLFVLM LMTFVRQDLM
QNWQTSLPKN TPDTFLVNVQ PDQKQTVTEL LAHHHINAPL VPMARGRLVA VNDMPIKAKE
QESDRARRLL ERESNIAVLS TLPSYNTLEQ QAQPESLSAQ QKALLTVSVE EGMAELFGIQ
LNDVLTFSFT GQEKQYRVDS IRRVQWQSFR LNFFFIVQPS VQKPLPISYI SNFTLSDKAV
SATELTQQLA QQASGVLLID AKRILTQVQT IMAQASWAVT ALYGFTLLAS LIVLFTATMA
SQQTRVQSWL LLRTLGATQK EIVKIGLMEF VLLGALAGLL AAVFAQIASW GIGYFVLDIP
LSFNLILWVT SLITGMLVLL MIGWVTQKRY LRQSPRRMAQ KWS
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