Gene Tcr_0547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0547 
Symbol 
ID3761594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp612828 
End bp613337 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content46% 
IMG OID637785259 
Producthypothetical protein 
Protein accessionYP_390817 
Protein GI78484892 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.733611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTA TCAAATCCCT TGCCATCTTA ATGTTAAGTA TTTGGGCATT CAATGCCCAG 
GCGAGCGCCG ATGGTGAGTC TGCACACCAG CTTAAACCGA TGCCGGAATT GGCAAATATC 
TCTTCCGATC ATTTCCCGGG CGACCCGGCG GAACATAAAG CCGTATATAT GTGGAACAAA 
TCGGACCCTG ATTATCAACA CCATATTTTA AATTCGATTC AAGCCATGAT TCGACTGTAT 
GGAAGCAATG TTGAAATTGC GGTGGTTGCC ATTGGCCCAG GCATTCATGC GCTTGCTAAA 
AAACCGCAAC GTAAAGTTGA AAAGCTGACT TATCAGCGTA TTGCCAGCTT TGCCAAAGAC 
TATGGCGTGC GCTGGATTGC GTGTGGTAAT ACCATGAGAA CCTTAAATTG GACGGACGCT 
GATATGCGTC CGTTTGCAGA ATATTCTGAA GTGGGTGCGG CCGCACTGGT AGCACTACAA 
GAAAATGGTT ACAAATTGCT GGTTTGGTAA
 
Protein sequence
MSFIKSLAIL MLSIWAFNAQ ASADGESAHQ LKPMPELANI SSDHFPGDPA EHKAVYMWNK 
SDPDYQHHIL NSIQAMIRLY GSNVEIAVVA IGPGIHALAK KPQRKVEKLT YQRIASFAKD 
YGVRWIACGN TMRTLNWTDA DMRPFAEYSE VGAAALVALQ ENGYKLLVW