Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0542 |
Symbol | |
ID | 3761589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 607277 |
End bp | 608584 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637785254 |
Product | histidine kinase |
Protein accession | YP_390812 |
Protein GI | 78484887 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5002] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR02966] phosphate regulon sensor kinase PhoR |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCAAAAG GAATTTCTAG AGAGCTTACA TGGATTGTAA CGGGTCTGTG GGTCGCTCTT TTCTTTGGTT GGGCAACCGA ATTATGGACG ATTACGCTCC TGGCCTATTT TCTCTTTTAT GTGATACGCC AACTTTACAG CATCAAACGC TTTGAACAAT GGATGAAAGG GTCAACCAAA GTTCCTTATC CTCCGAGTTC CGGGCTATGG GGGGAACTGA GCTACTTAGT GTCTCGCAAA CAGCGTTCAC TCGAAAAGCA CGCAGATCTT CAGTTCTATA AATCAGAACA ATTCTTAGCC GCTTCCATGA CTATCCCGGA TGCGATTATT TCTCTAAATG AATATAATCA GATTGAGTGG TTTAATAAAT CCGCCAAAAA AATCTTCAAA CTTAAGCACA GTGATACTGG GCGAAAAATC GAAACCTTGT TTCGCCATCC GGATTTTATC CAGTATTTAA AATCAAAACA CTATGGTAAA GGGATGATTC TTCAATCTCT CAATGGGATG CCGCGGGTGT TTAATATTAA ATTGTTTCCG TATTTTAAAG AGCATAAATT ATTGATTGTG AAGGATATAC ATGAGTTGTA TAGCCTGGCC CAGATTCGAC GAGATTTTGT GGCGAACGCT TCGCATGAAT TACGGACTCC TTTAACCGTG CTGAATGGTT ATCTTGAAGT AATGATTGAC AGTATGGAAC CGGACTCAAC CTGGCAAAAG CCGCTTGAGC AAATGCATCA GCAGTCTTAT CGAATGCAAT CCATTATTGA TGACCTGTTG ACGTTGTCGT CTATGGAGTC GGAAACGATC ACCGGGAAAC AAAAGCAGGT GAATGTGCCG CAAATTTTGC AGGAAATGCA TGTTGATGCA GAACAAATGA GTCATGGCAA ACACACGATA GATTTTAAAG TGGAGATGAA CTTAGCTTTA AAAGGCTATG AGGAACCATT AAAAAGTGTG TTTATGAACT TAATTTCGAA TGCAATTCGT TACACGCCGG AAAATAAAGC CATTGAAGTG CGTTGGTATC ACGACCAAAA AGGCGCGCAT TTCGAAGTTA AAGACAATGG CATCGGGATT GCCCAAGAAC ACTTGACTCG TTTAACCGAA CGTTTCTATC GAGTGGATAC GGCTCGATCG AGAGACACAG GGGGAACTGG GCTTGGCTTG GCGATCGTGA AGCACATTCT GGAAAGGCAT CATGCTAAAT TGGTGGTGAC CAGTCAACTA GGGATAGGAT CGGTCTTCCG ATGCGATTTT CCAAGTAGAG CGATGGTTTT ATTACAGGAT TCCGAAAAAA AATCATGA
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Protein sequence | MSKGISRELT WIVTGLWVAL FFGWATELWT ITLLAYFLFY VIRQLYSIKR FEQWMKGSTK VPYPPSSGLW GELSYLVSRK QRSLEKHADL QFYKSEQFLA ASMTIPDAII SLNEYNQIEW FNKSAKKIFK LKHSDTGRKI ETLFRHPDFI QYLKSKHYGK GMILQSLNGM PRVFNIKLFP YFKEHKLLIV KDIHELYSLA QIRRDFVANA SHELRTPLTV LNGYLEVMID SMEPDSTWQK PLEQMHQQSY RMQSIIDDLL TLSSMESETI TGKQKQVNVP QILQEMHVDA EQMSHGKHTI DFKVEMNLAL KGYEEPLKSV FMNLISNAIR YTPENKAIEV RWYHDQKGAH FEVKDNGIGI AQEHLTRLTE RFYRVDTARS RDTGGTGLGL AIVKHILERH HAKLVVTSQL GIGSVFRCDF PSRAMVLLQD SEKKS
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