Gene Tcr_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0538 
Symbol 
ID3761585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp603253 
End bp604899 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content43% 
IMG OID637785250 
Productphosphate ABC transporter permease 
Protein accessionYP_390808 
Protein GI78484883 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0581] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR00974] phosphate ABC transporter, permease protein PstA 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGT GGTTCAAAAA AGGCGAGCAT TGGGTTTGGT TTAGTGCGTC AACTGTCAGT 
ATCAGTGTTG TATTGGTGAT TGGGTTGTTG TTAATGATTT CATTTCGTGG CTTAGTGCAT
TTTTGGCCTC ATGAAGTGTA TGAATATGAA GTCAAAACAG ACAATGGCAA AATTGAGCAT
GTTGTCGGAG AGTTGCATGA AACCAAGCTG AAAGAATTCC AAGATAAATC CTCTAAAGAT
GGAATCAAAA AGATTCCTCA GTTCTTGATT AAGGTCGGAA ACCGAGATGT TTATGGTATT
GACTTCCGCT GGATCAATAC GGCACAAATC GTCGGACGCG AAGATGTTTT AGCCGATGAT
GTGACCGTTG TAGAACGATA TGAGTGGGGA AATGTGTATG GGTATCTAGC GTCGATTAAA
CAAGACGGTA AAACCCTTGC AACAGGAAAA GATGTTCTTC CAAAAATGCA AAAGCTGGTG
GATGACGGGC AAGCGATTAA TGCTGAAATT AATCACATTG AAAAAGTTGT TTTAGGGGGC
ATTAACTATG ACCTGGAGCA GTTGCGTTTA AAACAAAAAC GGTTGGAAGC GCAAGGCTCT
TATTCAGACG AAATGGCCCG CGAGCTTGCC GAAAAACGTA AGGCACTTAA TGCGGAGTTT
GAATCGCATC AGGCCTCCTT AAAAAAACTG TATAAGGAAT CTAAGAGCTT AGGAGAAGTC
ACGCTTAAAA TCGCTGGCGG AAAAGTCATT CATGTACCAA TTAAATCGAT TGTGCGCTTC
TGGCAACCGA ATAATATGGT GTTGAGCGAA AAAGTTGGTT TCTTCTTTGA TTCAATTGGG
CATTTTTTGT TGGATGAACC ACGTGAAGCG AATACCGAAG GCGGTGTGTT TCCAGCGATA
ATCGGGACCA TTACTATGGT GATCCTGATG GCGATCTTTG TGACGCCAAT GGGGGTGATT
GCCGCCATTT ATATGAGTGA ATATGCCAGA GATGGGCTGG TATTGCGAAC GGTTAGAATC
TCCATCAACA ACTTGGCTGG GGTGCCGTCT ATTGTATTTG GTATCTTTGG GTTAGGGTTC
TTTGTTTACA TTATAGGGGG GTCTATCGAT GAGCTCTTCT ATAGCTACGC CTTGCCGAGT
CCAACATTTG GTACGCCTGC ATTATTATGG GCTTCTTTGA CCATGGCGTT ATTGACGTTG
CCGGTGGTCA TTGTTTCAAC TCAGGAAGGG CTTTCTCGTA TTCCAAGAGC GTTGAGAGAA
GGTGGTTTGG CGCTGGGCGC GACTAAGTCG GAAACCATTA TGAAAATTGT CCTTCCGATG
TCGATGCCTG CGATTATGAC CGGATTGATT CTGGCGGTTG CGCGTGCCGC AGGGGAAGTG
GCTCCGTTGA TGTTAGTGGG TGTGGTTAAG TTAGCCCCTG AATTGCCTAT TGATTTGAAT
GCACCTTTTG TTCATTTGGA TAGAAAATTT ATGCACCTAG GGTTTCATAT TTATGATGTG
GGCTTTCAAA GCCCCAATGT AGAAGCCTCT CAGCCATTAG TGTATGCCAC GTCATTGCTA
TTAGTATTAA TCATTGTCGG CTTGAATTTA GGGGCGATTA CCATTCGTAA TAAGTTAAGA
GAAAAATACA AAGCCTTGGA TAATTAA
 
Protein sequence
MKEWFKKGEH WVWFSASTVS ISVVLVIGLL LMISFRGLVH FWPHEVYEYE VKTDNGKIEH 
VVGELHETKL KEFQDKSSKD GIKKIPQFLI KVGNRDVYGI DFRWINTAQI VGREDVLADD
VTVVERYEWG NVYGYLASIK QDGKTLATGK DVLPKMQKLV DDGQAINAEI NHIEKVVLGG
INYDLEQLRL KQKRLEAQGS YSDEMARELA EKRKALNAEF ESHQASLKKL YKESKSLGEV
TLKIAGGKVI HVPIKSIVRF WQPNNMVLSE KVGFFFDSIG HFLLDEPREA NTEGGVFPAI
IGTITMVILM AIFVTPMGVI AAIYMSEYAR DGLVLRTVRI SINNLAGVPS IVFGIFGLGF
FVYIIGGSID ELFYSYALPS PTFGTPALLW ASLTMALLTL PVVIVSTQEG LSRIPRALRE
GGLALGATKS ETIMKIVLPM SMPAIMTGLI LAVARAAGEV APLMLVGVVK LAPELPIDLN
APFVHLDRKF MHLGFHIYDV GFQSPNVEAS QPLVYATSLL LVLIIVGLNL GAITIRNKLR
EKYKALDN