Gene Tcr_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0529 
Symbol 
ID3761499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp592220 
End bp594310 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content47% 
IMG OID637785241 
ProductDNA-directed DNA polymerase 
Protein accessionYP_390799 
Protein GI78484874 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000324921 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGATA CTGTTTTAGC CCGTAAGTGG CGACCGAAAA ACTTCTCTGA ATTAGTCGGA 
CAAACCCACG TGATGCAGGC GCTTTCTAAT GCGCTGGATC AGCAACGATT GCATCATGCG
TATTTGTTTA CTGGAACTCG CGGGGTGGGA AAAACGACGA TTGCTCGTAT TTTTTCTAAG
GCGTTGAATT GTGAACAAGG CATTACTTCT AAACCCTGTG GTGTTTGCTC TACATGCCGT
TCCATTGATG AAGGACGTTT TGTTGATTTG ATTGAAGTGG ATGCAGCCTC TAAAACCAAG
GTCGAAGATA CGCGGGAGTT ATTGGAGAAT GTTCAGTATG CTCCGGTTCA AGGGCGCTAT
AAAGTGTATC TGATCGATGA AGTCCACATG TTGTCGAAAA GCAGTTTCAA TGCCTTGTTG
AAAACATTGG AAGAACCGCC TGAACACGTT AAGTTCTTGT TGGCAACGAC CGATCCTCAT
AAGTTACCGA TTACGGTTCT TTCCCGTTGT TTGCAGTTCA ATTTAATGCG TTTGACATTG
CCTCAGATTC AACAGCATCT TGCGTATATC TTGCAGCAAG AACAAGTCAC TTTTGAAGAG
ACTGCGTTGG CAATGATCGC AAAAAGTGCG GATGGCTCCG CCAGAGATTC GTTGAGTATT
TTGGATCAAG CCATTGCGTA TGGGGGTGGA AAGGTTCAGT ACGACGCTGT TCAAGCCATG
TTGGGATTGG TGGATCAGCA ATTTACGTTG AACATTTTAT CCGCACTGGC AAACGAATCG
GCCGACGAAT TAAAAGAGGT GATTCAACAG TTGGCGTTGA TGGGCGTGGA TTACACCGCA
TTAAATGGGC AGTTGATTGA AGCCTTGCAC CAGATGAGTA TGTTACAGGT ATTGGGCGAT
TTGACTGAAA GCAGTTTGAT TGAAGTCGAA ATGCTGCAAA AATTGAGTGA ACAGTTGTCG
CCAGAGCGCA TTCAGGTGTT GTACCAAATT GCGTTGTTGG CGAAACAAGA TATGGCATTG
GCTCCGGATA TTCGAATCGG CTTTGAGATG TCTCTTTTAA GAATGTTGGC TTTTAAGCCG
GTTTTTTCTG AGACGATGAG TTCTATGGAA CAGACGGAAC CAGAAGAAGG GATGAGCCGC
CAGGAGAATG TAAAAACAGC CAGGCCTGGC CAGAATGAGC CTGCGGCAAT ACCTAACCAA
CCGGCTGCTG CGGATGAAGC TCGTACGAAT TTCGAAGCGC CTTCACACTT TGAAGCACCT
TCCGCTCCTC AGTCGTCTAT GCCCGAGACC CAAGCGGCAC CACAATCGTC CGCTCCCCAG
CCTTCAGGCG AAATGGATCA TTTAACCGAT TTGAAAGCGA GGTTAGATTC AACGCTGGGA
AAGTCTGAAG CACCGATTGA GCATCGTGAG AATCACGATG CGGAGGTGCC CACGTTTGAC
GTTCCAAGTG GTCAATCATT GGAACAATCA GCATCGTTTT TAACTGAAAC CCGTCAAGAG
GATGATCGTC CCGTAGAGTC GGCAGCCGCT TTTCAAGCTT CCTCGCACGT TCCTGTACAA
AAAGCGGTAA CAGAAGAGGC GATGGCACCG GCATTTGAAT CGCCTGGAAT GGAAAGCGTT
ACGCCAAGTT CACAAGAGCA TTTTGAGCAA GAGCCCGTTT CCGAAGCCGT TGTGGCAGAT
GCGCCAATTG AAATGAATGC GGATACAGCA TCGGTAACGG ATTGGATCGC GTTAATTACT
CAGTTGCAGT TAGAAGGTAT GGCGGCAGAA TTGGCTAGGC AATCGATTTT AGTTAAGCGA
GATGCACAAA GTTTAACGTT GAGTATTGAC CCTGAACAAG TGCACGCCAA AACAGAGCTA
GCACTTCAGC GATTGGAAGA ACAAGTGAAG GCTCAGCTGG GTGTGCGCTT GATTTTTGTG
GATTACCCGG AAGATCATTG GACGCCTGCC AAGCATTTTG CGGCCGAAGC AAAGGCACGG
CAGGGAAATG CGGCCGAGAG TATTCGAAAT GACGCCGTTG TGCAGAACTT AATACAAACA
TTGAATTTGA AAGTGATTGA ATCTTCGATT CGACCCATTA CGAAAGCATA A
 
Protein sequence
MTDTVLARKW RPKNFSELVG QTHVMQALSN ALDQQRLHHA YLFTGTRGVG KTTIARIFSK 
ALNCEQGITS KPCGVCSTCR SIDEGRFVDL IEVDAASKTK VEDTRELLEN VQYAPVQGRY
KVYLIDEVHM LSKSSFNALL KTLEEPPEHV KFLLATTDPH KLPITVLSRC LQFNLMRLTL
PQIQQHLAYI LQQEQVTFEE TALAMIAKSA DGSARDSLSI LDQAIAYGGG KVQYDAVQAM
LGLVDQQFTL NILSALANES ADELKEVIQQ LALMGVDYTA LNGQLIEALH QMSMLQVLGD
LTESSLIEVE MLQKLSEQLS PERIQVLYQI ALLAKQDMAL APDIRIGFEM SLLRMLAFKP
VFSETMSSME QTEPEEGMSR QENVKTARPG QNEPAAIPNQ PAAADEARTN FEAPSHFEAP
SAPQSSMPET QAAPQSSAPQ PSGEMDHLTD LKARLDSTLG KSEAPIEHRE NHDAEVPTFD
VPSGQSLEQS ASFLTETRQE DDRPVESAAA FQASSHVPVQ KAVTEEAMAP AFESPGMESV
TPSSQEHFEQ EPVSEAVVAD APIEMNADTA SVTDWIALIT QLQLEGMAAE LARQSILVKR
DAQSLTLSID PEQVHAKTEL ALQRLEEQVK AQLGVRLIFV DYPEDHWTPA KHFAAEAKAR
QGNAAESIRN DAVVQNLIQT LNLKVIESSI RPITKA