Gene Tcr_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0526 
Symbol 
ID3761494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp588720 
End bp589079 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content45% 
IMG OID637785237 
Productmembrane protein-like 
Protein accessionYP_390796 
Protein GI78484871 
COG category[S] Function unknown 
COG ID[COG3671] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000156824 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAT CCACTCTGCC TGACACAACG ATGGCAAAAG TGATCTATAT ACTGTATTTA 
TGCAGTTTAT TGGCCGGTAT TACAGCGATT GTCGGGGTTG TGATCGCTTA TACCAAACGC
TCCGACAAGG ATGCTCCACT CTGGTTAACA GCGCATTATC ATTATCAAAT TCAAACCTTT
TGGTATGGAC TGGCTTACTT TCTGGTTGGG TTGGTATTGA CCCCGATTGT CATTGGCGGG
TTTATTATTT TATGGTGGAT TGTTTGGTTA ATCGTGCGCT CAATTAGAGG GTTAAGCGCA
CTAGAAAGGC AGAAGGCCAT CGAGGGCACA TTCTTTGGGT TCGGCAATGA GCCGGCTTAA
 
Protein sequence
MSQSTLPDTT MAKVIYILYL CSLLAGITAI VGVVIAYTKR SDKDAPLWLT AHYHYQIQTF 
WYGLAYFLVG LVLTPIVIGG FIILWWIVWL IVRSIRGLSA LERQKAIEGT FFGFGNEPA