Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0522 |
Symbol | |
ID | 3761490 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 585171 |
End bp | 586043 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637785233 |
Product | TPR repeat-containing protein |
Protein accession | YP_390792 |
Protein GI | 78484867 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.598532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTGTTG TTGCTTTATT GAGTGTTTTT ATCGCACCGG TTTCGGCTGC GGAAAGACAC TCAAAGGAAA CGCAGGATGT AACTGAGCTG AAAGAGCCGA TGTACAATCC TTTTATTGAG CGTTATGTCA TGGATGAATT AAGACAATTG CGTGTTGACA TGAATGATCT GGAAGTTACC TTGACGAAAG AAGTGGTTAA CCGAGAGTTG TCTGCGACAT CTCGAGCGGT AGGCTATGCC ACCGATACGG TGACATATTT CTTCTATCTA ATTGCAGGGA TTTCTTCCGT TCTTTTATTG GTCGGGTGGA ATTCCATTCG TGAAATAAAA GATAAAGTTC TGAACTTGGC AGACACCAAA GTCAGTAAAG TGATTAAAGA GTACGAAGCA CGTCTTGAAA AACTGGAAGA CGAGTTGAAT CGAAAATCAC GTGGTATTAC CAGTGCGCAA AAACGATTGT CGCAACATCA GGACATCCAT AGCTTGTGGT TAAAAGCAGG GCAAGAGCAA ATTCTGAGTA ATCGTATGGC GATTTACGAT CAGATTTTAG AGCTGGACCC TGATAACACC GAAGCAATGA CTTATAAAGC GGATATTGCG CTTGAAATGG ATGAGCCTCA ATGGGCGGTT AACCTGTGTA ATCAAGCGCT GAGAATTGAC CCTGAAAACA AACATGCCTT TTATCAATTG GCTGGCGCTT ATGCCATGAT GGATAAGCAT GTCGAAGCCA TTGAGTACCT ACAAAAAGCA TTGGAAGACT CAGAAGGGTA CAAAGAGCAA GTTCAAAATG ATCCTGTCTT TAGATCCATG CGAGATGATG CTGAGTTTAA AAAATTGATT GAAGAAGGTG ATTCCACCAG TTCGTTAACA TAA
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Protein sequence | MIVVALLSVF IAPVSAAERH SKETQDVTEL KEPMYNPFIE RYVMDELRQL RVDMNDLEVT LTKEVVNREL SATSRAVGYA TDTVTYFFYL IAGISSVLLL VGWNSIREIK DKVLNLADTK VSKVIKEYEA RLEKLEDELN RKSRGITSAQ KRLSQHQDIH SLWLKAGQEQ ILSNRMAIYD QILELDPDNT EAMTYKADIA LEMDEPQWAV NLCNQALRID PENKHAFYQL AGAYAMMDKH VEAIEYLQKA LEDSEGYKEQ VQNDPVFRSM RDDAEFKKLI EEGDSTSSLT
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