Gene Tcr_0522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0522 
Symbol 
ID3761490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp585171 
End bp586043 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content42% 
IMG OID637785233 
ProductTPR repeat-containing protein 
Protein accessionYP_390792 
Protein GI78484867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.598532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTGTTG TTGCTTTATT GAGTGTTTTT ATCGCACCGG TTTCGGCTGC GGAAAGACAC 
TCAAAGGAAA CGCAGGATGT AACTGAGCTG AAAGAGCCGA TGTACAATCC TTTTATTGAG
CGTTATGTCA TGGATGAATT AAGACAATTG CGTGTTGACA TGAATGATCT GGAAGTTACC
TTGACGAAAG AAGTGGTTAA CCGAGAGTTG TCTGCGACAT CTCGAGCGGT AGGCTATGCC
ACCGATACGG TGACATATTT CTTCTATCTA ATTGCAGGGA TTTCTTCCGT TCTTTTATTG
GTCGGGTGGA ATTCCATTCG TGAAATAAAA GATAAAGTTC TGAACTTGGC AGACACCAAA
GTCAGTAAAG TGATTAAAGA GTACGAAGCA CGTCTTGAAA AACTGGAAGA CGAGTTGAAT
CGAAAATCAC GTGGTATTAC CAGTGCGCAA AAACGATTGT CGCAACATCA GGACATCCAT
AGCTTGTGGT TAAAAGCAGG GCAAGAGCAA ATTCTGAGTA ATCGTATGGC GATTTACGAT
CAGATTTTAG AGCTGGACCC TGATAACACC GAAGCAATGA CTTATAAAGC GGATATTGCG
CTTGAAATGG ATGAGCCTCA ATGGGCGGTT AACCTGTGTA ATCAAGCGCT GAGAATTGAC
CCTGAAAACA AACATGCCTT TTATCAATTG GCTGGCGCTT ATGCCATGAT GGATAAGCAT
GTCGAAGCCA TTGAGTACCT ACAAAAAGCA TTGGAAGACT CAGAAGGGTA CAAAGAGCAA
GTTCAAAATG ATCCTGTCTT TAGATCCATG CGAGATGATG CTGAGTTTAA AAAATTGATT
GAAGAAGGTG ATTCCACCAG TTCGTTAACA TAA
 
Protein sequence
MIVVALLSVF IAPVSAAERH SKETQDVTEL KEPMYNPFIE RYVMDELRQL RVDMNDLEVT 
LTKEVVNREL SATSRAVGYA TDTVTYFFYL IAGISSVLLL VGWNSIREIK DKVLNLADTK
VSKVIKEYEA RLEKLEDELN RKSRGITSAQ KRLSQHQDIH SLWLKAGQEQ ILSNRMAIYD
QILELDPDNT EAMTYKADIA LEMDEPQWAV NLCNQALRID PENKHAFYQL AGAYAMMDKH
VEAIEYLQKA LEDSEGYKEQ VQNDPVFRSM RDDAEFKKLI EEGDSTSSLT