| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0511 |
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| Symbol | |
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| ID | 3761990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 572734 |
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| End bp | 574914 |
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| Gene Length | 2181 bp |
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| Protein Length | 726 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637785222 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_390781 |
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| Protein GI | 78484856 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.971764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAATC AAACTGTGAC AGAAGAAGCT GTTCGAAGAC TTGCTGAAGG AACACATCAT
GATCCTTTTC AAATTTTAGG GTGCCATGCC GTTGGGAAAA AATGGGAGGT ACGTGTGTGG
CTCCCCACGG CTGAATCAGC CTCTGTGGAA GGATGGCATG CTTTGACGCG TGTGGAAGGC
ACCAGTTTAT TCATTGCGAG CTTGACGGAA AAACAGAAAA AAGCACTTCC CTTGCACTTT
AAAGTGAACT GGGTTGAAGC GAATGGCTCT GAACACACGG TGGTGTCGCC CTATACCTTT
TTACCCCAGT TAGGTGAGTT GGATTTACAT CTTTATGCCG AAGGACGTCA CTGGCATGTA
TATGACGTGT TAGGCGCTCA GGTAAAAGAA GTAGACAATA TTTCAGGCGT GCAGTTTTCG
GTTTGGGCGC CTGCGGCCAG TCGTGTTTCC GTCGTCGGTG ATTTTAATGG TTGGAATGGC
CTGCGCCATC CTATGCGTAC GAATGGACAG TCAGGCGTTT GGGAGCTTTT TATTCCCGGA
ATGGTTTCGG GGGATATTTA TAAGTTTGAA ATTCGAAATT ATCAAACCGA TCAACTGCTG
GTTAAAACGG ACCCTTATGC AAAAGCCATG GAGTTCAGGC CTCAAACTGG ATCGATTGTG
TATGACTCGA CGTTTCAATG GCAAGACCGT GACTGGTTAG CTGCTCGCGC ACATTTTGAT
TGGCAGGCAT CGCCGATTAA TATTTATGAA GTTCACTTGG GATCTTGGCA ACGGGATCAT
GACGGTTTTT TCTTGAATTA TAAAGAAATT GCGCAACGTC TTGTCGAATA TGTGAAGTGG
ATGGGATACA CCCATATTGA GCTTCTGCCG ATTTCGGAAC ACCCGTTAGA CGAATCTTGG
GGGTATCAAA CAACAGGGTA TTTTTCTCCT ACGAGCCGTT TTGGTTCGCC AGACGATTTT
CGATATTTTG TGAATTACTG TCATGAAAAC GGTATTGGCG TCTTTCTGGA TTGGGTTCCG
GCGCACTTTC CAAAAGATGA ATTTGCACTG GCTCGGTTTG ACGGTACAGC GCTGTATGAA
CATGAAGACC CCCGAAGAGG CGAACATCAG GATTGGGGCA CTTACATTTT TAATTATGGT
CGAAATGAAG TGCGGAACTT TCTGATTGCC AATGCGCTCT ATTGGTTAAA AGAATTGCAC
ATTGATGGGC TGCGTGTCGA TGCTGTGGCG TCCATGCTTT ATCTGGATTA TTCGCGTAAA
GATGGTGATT GGTTGCCGAA CCAATATGGT GGGCGAGAAA ATATAGAAGC GATTGAATTT
TTGAAAACGC TCAATGCTGA AGTGCATGCC CAATGCCCCG GCGCTTTGAT GATGGCGGAA
GAATCAACTT CTTGGCCTAT GGTCTCACGT CCTACATGGA TGGGCGGACT CGGTTTTTCG
ATGAAGTGGA ATATGGGGTG GATGAATGAC ACGCTGGATT TTTTTCAGCA AGACCCCATT
TATCGACCGT ATCACCATAA TCAACTGACC TTTAGCCAGA TGTACGCTTA TTCGGAAAAT
TTTATTTTGC CTTTATCTCA CGATGAAGTC GTGCATATGA AGCATGCATT GGTCAGTAAA
ATGCCAGGAG ACACGTGGCA AAAAATGGCG AATATGCGTT TGCTCATGGG GTATCAAACG
TTAAACCCCG GGAAAAAGCT ACTCTTTATG GGGGGTGAGT TCGCGCAATG GCAAGAATGG
AGCGAAAGCC GCGGGTTGGA TTGGTATCTT TGTGAACAAC CCGCCAACCG AGGGGTGCAG
ATGCTGGTGC GGGATTTGAA TTTGTTGTAT CAAACATCGC CTGCATTATA TTGTCATGAT
TTTGATCAAG AAGGATTTGA ATGGATTGAT TGTCATGATT ATGAGCAGTC GGTACTGAGT
TTTGTAAGAA TCTCCGAAAA AGAATCTTTG ATCTGTGTCT TTAATTTCAC GCCTGTGCCT
CGTTATGATT ATCGTATAGG CTTGCCGGAA ACCGGTATTT ATGAAGAGGT GCTTAATTCT
GATTCTGAAC TCTATGGCGG TGGTAATGTC GGCAATTCAG GGCAATTAAC GACAGAGGAT
CAGCGCTGGA TGAATCGTCC TTGTTCAACC ACATTAGTTT TACCACCGCT TGCAGTGGTT
GTGTTAAGAA AAAAATCCTA G
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| Protein sequence | MMNQTVTEEA VRRLAEGTHH DPFQILGCHA VGKKWEVRVW LPTAESASVE GWHALTRVEG
TSLFIASLTE KQKKALPLHF KVNWVEANGS EHTVVSPYTF LPQLGELDLH LYAEGRHWHV
YDVLGAQVKE VDNISGVQFS VWAPAASRVS VVGDFNGWNG LRHPMRTNGQ SGVWELFIPG
MVSGDIYKFE IRNYQTDQLL VKTDPYAKAM EFRPQTGSIV YDSTFQWQDR DWLAARAHFD
WQASPINIYE VHLGSWQRDH DGFFLNYKEI AQRLVEYVKW MGYTHIELLP ISEHPLDESW
GYQTTGYFSP TSRFGSPDDF RYFVNYCHEN GIGVFLDWVP AHFPKDEFAL ARFDGTALYE
HEDPRRGEHQ DWGTYIFNYG RNEVRNFLIA NALYWLKELH IDGLRVDAVA SMLYLDYSRK
DGDWLPNQYG GRENIEAIEF LKTLNAEVHA QCPGALMMAE ESTSWPMVSR PTWMGGLGFS
MKWNMGWMND TLDFFQQDPI YRPYHHNQLT FSQMYAYSEN FILPLSHDEV VHMKHALVSK
MPGDTWQKMA NMRLLMGYQT LNPGKKLLFM GGEFAQWQEW SESRGLDWYL CEQPANRGVQ
MLVRDLNLLY QTSPALYCHD FDQEGFEWID CHDYEQSVLS FVRISEKESL ICVFNFTPVP
RYDYRIGLPE TGIYEEVLNS DSELYGGGNV GNSGQLTTED QRWMNRPCST TLVLPPLAVV
VLRKKS
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