Gene Tcr_0505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0505 
Symbol 
ID3761984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp565183 
End bp566625 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content46% 
IMG OID637785216 
Productbifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 
Protein accessionYP_390775 
Protein GI78484850 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGC ACGATTTTTC CAAAACCAAA ATTTTAGTCG TCGGTGACGT CATGCTGGAT 
CAGTATTGGT CCGGAAGAGC AGGCCGAATT TCTCCAGAAG CGCCTGTCCC CGTTGTAAAG
GTCGCCGATG AAAATGTCCG CGCGGGTGGG GCGGCCAATG TGGCACTTAA TATTGCCGAT
TTAGGGGCCG ACGTAAACTT AATGGGCGTG ATTGGTCAAG ACAGTTTTGG TCAGCAACTA
AACCAAGTAT TAGAGCAAGC CGGGGTTGCT TCTAACTGGG TTTATTCAGA GTCGGGTACG
ATTTGTAAGC TACGCGTTTT GAGCCATCAT CAACAACTGA TTCGGATGGA CTTTGAAAAT
GCCGTTCCTG AGCTTTCGGC GAAAAGTTTG GCCAAATTAG TGGCTGAAAA AGTGGCTGAT
TATGATGTTT TGGTCATCTC GGATTATGCT AAAGGCGCAT TGCAGTTTGT TGAAGAAATG
ATTCAAGCAG CCAAGTCTCA ACAGGTTCCG GTTTTAATTG ATCCGAAAGG TAATGACTTT
TCACGCTATG CCGGCGCGAC ATTGGTCAAA CCTAATCAAG GAGAATTTGA ACTGATTGTC
GGCGTATGTG CCGATCAAGA TGATTTAATT GAGAAAGCCA AGCAATTAAT ACAAGAAATT
AATATTGATG CCTTACTGGT GACTCGAAGT GAGCATGGCA TGGCTTTGAT TGAAAAAGAT
GCCGGTGCAA CCATTTTAAA ATCACGTGCA CAGGAAGTGT TTGATGTTAC CGGTGCCGGC
GATACGGTTA TTGCGACTTT GGCAACCGCT TTCGGAAGTG GGTTGAGTAT GCCTAAATCG
GTTAAGCTGG CAAATGAAGC CGCCAGTATC GTGGTACGAA AAGTGGGGAC GTCAACGGTT
TCAAAAGTGG AGTTAGAAGA GCAGTTAAAT GCCTCTATGC GCCATCAGGG CTATGCCTCT
ATGAGTGAGG ATGAAGTTCA TTCCTTGGTT CAGATTGCTC AATCCAAAGG TGAAAAAGTG
GTGTTTACCA ATGGGTGTTT TGATTTGTTG CACAGTGGGC ATGTTCGCTA TTTAAATGAA
GCCGCTCGCC AAGGCGATCG TTTGGTGGTA GCGGTGAATT CAGATGAGTC GGTTAAGCTC
TTAAAGGGCG ACAGTCGTCC TATCGTCGAA TTAGCAGGGC GGATGGAGTT GTTGTCTGCT
TTGAGTTGTG TTGATTGGGT TGTCCCTTTT AATGAGGAAA CGCCTGAGCG TTTAATTTGT
AAACTGGCAC CGGATGTTTT GGTTAAAGGT GGCGATTATA AGCCGGACGA AATTGCGGGT
GCACAGTGTG TTTGGGATAA AGGCGGAGAA GTCGCGGTTC TTTCTTTTTG GGAAGGTTAT
TCCACCACGC GTATGGTCGA TAAGATTCAA GAAGCTGAAA TAAAAGAAGG TGCGGCACAG
TGA
 
Protein sequence
MNMHDFSKTK ILVVGDVMLD QYWSGRAGRI SPEAPVPVVK VADENVRAGG AANVALNIAD 
LGADVNLMGV IGQDSFGQQL NQVLEQAGVA SNWVYSESGT ICKLRVLSHH QQLIRMDFEN
AVPELSAKSL AKLVAEKVAD YDVLVISDYA KGALQFVEEM IQAAKSQQVP VLIDPKGNDF
SRYAGATLVK PNQGEFELIV GVCADQDDLI EKAKQLIQEI NIDALLVTRS EHGMALIEKD
AGATILKSRA QEVFDVTGAG DTVIATLATA FGSGLSMPKS VKLANEAASI VVRKVGTSTV
SKVELEEQLN ASMRHQGYAS MSEDEVHSLV QIAQSKGEKV VFTNGCFDLL HSGHVRYLNE
AARQGDRLVV AVNSDESVKL LKGDSRPIVE LAGRMELLSA LSCVDWVVPF NEETPERLIC
KLAPDVLVKG GDYKPDEIAG AQCVWDKGGE VAVLSFWEGY STTRMVDKIQ EAEIKEGAAQ