| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0500 |
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| Symbol | |
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| ID | 3761979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 559161 |
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| End bp | 560537 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637785211 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_390770 |
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| Protein GI | 78484845 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCATA TAAGTACGAT AAAAGAAATG GTCAGAATCA GCCCTCTCGA TAAATTAGAG
GTCGAGAAAC ATTATTCTTA CTTACTGGAG CAAGAACCTC AATTTGAGCA AAGTGTGGCT
CAATGCATTG AGGTTTACCA GTTGCAATCC CTGACACCAG AAACCCTTCT GGCGAATGAT
TATTATCGAA ATTTGATTCA TGGTGTGTAC CAGAACAGTT TTTATAATGT TCAGTATCAC
CAGACACTCT ATTGGTTAAA AAGTGGGCTC ACCCAAAATC AAATTTTATT GCTGTTAGCG
CACATGCGAA TGCAATTTAT TGTGTACGCT GAAGGGTTGA AAAGTGATGC TCTGGCCAGC
AGTTTGTGCC ACGTTTTGGA TGTTGGGCAA TCCATTGTCG CCACGATTTT TAACGTGGCC
GAATCGATAG AGCGTATGAA AGCACGCTCC AGCCAGGAAA TTCGTCGACT TAAAAATTCT
TATCGTTTGG TGGCGTTTGA TTTACCAAAA GATGTTTTGA AAGCTTATAT TGATCATCAA
ACCTGGAAAA TTTCAGCTTT TGAGCTCTCA TTAGGGTACG AAACTGATAT TCAAGGGTTT
GAAGCTAGCC ATCTAAAATG TCGTTTAGCT AAATGGTTGG ACAATGGTGG GCTAGAGTTG
ATTCCAAAAG CCAAACGTCA TAAGTTTTTA AACGATCATG AACAGGTTCA TCGTTTAGGG
ACGATGGCGA TTGAAGAGTC GGAGCATAAC CGTCCAGAAA ACATTGTTGA GTTGCTGTTT
GAAATGGAAA TAGCTTCTGA AGATGTCATG GAAGTACTGC TTAACTTAAT CGAACAGGAA
TTTGTGGCGG CCGCTAATGC GGATTCGCTC ACGGGCTTTC CAAACCGACG TGCGTTTGAT
CTGGAATTTG AAAAAGCACT GGCCTTTGCG AAGCGTCATG ATTTTTGGCT GGATTTAGTG
GTTGTCGATG TCGACTTCTT TAAAGCCGTT AATGATGAAC ATGGTCATGT GGTCGGCGAT
GCCGTTTTGA AGCGAGTGGC TGAAATTTTA GATGACGTAG CGCGCACCGA AGATATGCTG
TTCCGTTGGG GTGGCGAAGA GTTCGTGATC ATCACCTTGG ATAAGGATTC AGAAGGCTCG
GAAATGCTGG CGGAAAGGAT TCGTAAAGCG GTTGAAGACG AGGTGTTTTT TGCCGGAACC
GATCAGGAGA TGCGTTTAAC CGTCAGCTGC GGGGCTTTGA GTTACTGGGC GGGTTTAAGT
TTGTCGGAAG AAGAGGTTTT TGAACTGGCG GACAAACAAC TTTATTTGGC GAAAGAAAGT
GGCCGTAATC AAGTTTGCCA TCAAGTATAT GATGTGGTTC CGATCCAAAA AGCATAA
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| Protein sequence | MIHISTIKEM VRISPLDKLE VEKHYSYLLE QEPQFEQSVA QCIEVYQLQS LTPETLLAND
YYRNLIHGVY QNSFYNVQYH QTLYWLKSGL TQNQILLLLA HMRMQFIVYA EGLKSDALAS
SLCHVLDVGQ SIVATIFNVA ESIERMKARS SQEIRRLKNS YRLVAFDLPK DVLKAYIDHQ
TWKISAFELS LGYETDIQGF EASHLKCRLA KWLDNGGLEL IPKAKRHKFL NDHEQVHRLG
TMAIEESEHN RPENIVELLF EMEIASEDVM EVLLNLIEQE FVAAANADSL TGFPNRRAFD
LEFEKALAFA KRHDFWLDLV VVDVDFFKAV NDEHGHVVGD AVLKRVAEIL DDVARTEDML
FRWGGEEFVI ITLDKDSEGS EMLAERIRKA VEDEVFFAGT DQEMRLTVSC GALSYWAGLS
LSEEEVFELA DKQLYLAKES GRNQVCHQVY DVVPIQKA
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