| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0476 |
|---|
| Symbol | |
|---|
| ID | 3761577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 532709 |
|---|
| End bp | 533671 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637785187 |
|---|
| Product | transporter-associated region |
|---|
| Protein accession | YP_390746 |
|---|
| Protein GI | 78484821 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4535] Putative Mg2+ and Co2+ transporter CorC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACA GTAGTAGCGG CTCTTCGTGG TTTGAAAAGC TTTCCAAGTT ATTTTCAGAT
GAACCGGAGA GCCGGGAAGA TTTAGATTCA TTTTTGCAAG AAGCCCAAGC ACAGGACTTG
ATTGATAAAG ATGCACTGTT AATGATTCAA GGGGTGTTGG ATGTGTCGGA AGCGCGTGTC
CGAGATGTCA TGATCCCAAA AGTGCAAATG TCTTGTGTGG ATGAAGCAGA TGAATTGGAT
GTCATTTTAG AGACTATGCT GGATGCGGCG CATTCGCGTT ATCCAGTATT GTCAGCCGAT
ACCGATGAAG TCATTGGTAT TTTGCTGGCA AAAGATGTCT TGCGCGCGGT TGTCAAACAT
CAGTTAACCG ATAAAACTCA GTTGGAAGAA CTCTATCGAA CGCCTGTTTT GGTGTCGGAA
AGTAAGCGCT TGAATGTATT GCTGAGAGAG TTTAAAAACA GTCGAAATCA TATGGCGTTG
GTGGTTGATG AATATGGCGA AGTGGCTGGA CTGGTGACCA TTGAAGATGT CTTGGAGCAG
ATTGTCGGAG ACATTGAAGA TGAGCATGAT GAGGACGACG ATAATATTCA AAAACACATT
TCGGGTGCGT ATGCCGTGAA GGCCATTACG TCACTGGATG AGTTTAATCA ATTTTTCAAT
ACAACCTTTG AAGATGAATT GTTGGAAACG ATCGGCGGGG TTGTTGCCAA ACGATTGGGT
AAAATTCCAG AAGAGGATGA GGTCTTTGAA ATTGAAGGGT TGAGACTGAC CGTTTTGAAA
GCCGATGAGC GACGTGTCGA AAGTTTTTTG GTGGAAGAAA AGTCGGTGTT TGATGAAGAT
GGATCCGACC CGGAAGAGGC ACCACTAGAT TCAGAATCAC CAGAGGGTAG CGAGATTTCT
GAGACCCCAT CAGATCAACC GACAGAGAAA AACGAAACGG GTGCTCCTAA CCAGCCACAG
TAG
|
|---|
| Protein sequence | MSDSSSGSSW FEKLSKLFSD EPESREDLDS FLQEAQAQDL IDKDALLMIQ GVLDVSEARV
RDVMIPKVQM SCVDEADELD VILETMLDAA HSRYPVLSAD TDEVIGILLA KDVLRAVVKH
QLTDKTQLEE LYRTPVLVSE SKRLNVLLRE FKNSRNHMAL VVDEYGEVAG LVTIEDVLEQ
IVGDIEDEHD EDDDNIQKHI SGAYAVKAIT SLDEFNQFFN TTFEDELLET IGGVVAKRLG
KIPEEDEVFE IEGLRLTVLK ADERRVESFL VEEKSVFDED GSDPEEAPLD SESPEGSEIS
ETPSDQPTEK NETGAPNQPQ
|
|---|
| |