Gene Tcr_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0475 
Symbol 
ID3761576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp532085 
End bp532567 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content45% 
IMG OID637785186 
Producthypothetical protein 
Protein accessionYP_390745 
Protein GI78484820 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACACC TAGATTATCA AGTAGCAGCC GAAGAGGTTG ACGAAGCTGA GTTGCCGACC 
TATGAGCAAT GTTTAAAGTG GGTTGAGGTC GCATTGTTAG ATGATCGTTT GGATGGGGAA
ACCGAGTTGA CGATTCGTAT CGTTGATGAA GATGAAATTC AAACGCTTAA CCGTGATTAT
CGAGGAAAAG ATCAAACGAC GAATGTATTG TCATTTCCTT TTGAAAATCC ACCGGTGTTA
GTGGATCTGG GTGAAGAATT GCCTTATATC GGGGATTTGG TTATTTGTGC TCAAGTCGTG
GCGCAAGAAG CCAAAGCGCA GCATAAGCCT TTGGAGGCTC ATTGGGCGCA CATGGTCATT
CATGGTTGTT TGCATCTTCA GGGAATGGAT CATGTTGACG ATGACGAAGC CATCAAGATG
GAAGCGTTAG AAGCTGAAAT ATTGGCGGAT CTCGGCTATG ACTCACCTTA TGAATCGGAT
TGA
 
Protein sequence
MIHLDYQVAA EEVDEAELPT YEQCLKWVEV ALLDDRLDGE TELTIRIVDE DEIQTLNRDY 
RGKDQTTNVL SFPFENPPVL VDLGEELPYI GDLVICAQVV AQEAKAQHKP LEAHWAHMVI
HGCLHLQGMD HVDDDEAIKM EALEAEILAD LGYDSPYESD