| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0468 |
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| Symbol | |
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| ID | 3761569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 524850 |
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| End bp | 525737 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637785179 |
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| Product | methylation site |
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| Protein accession | YP_390738 |
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| Protein GI | 78484813 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000101161 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAAT CATCAATTCG TCAAAAAGGT TTCACGTTAA TTGAAATGGC GTTTGCGCTG
TTATTGATAG GCCTGATTGT TGGTGGTGGG TTGAGTTTTT TAGGGAGCTT TCATCAAGTT
GAAAATAGCA AAATTGCAGA AAAACAAATG CTGGAAATTA AGCAGGCAAT GCTGACCTAT
TTAAAAGTCA ATAAGCATTT GCCTTGCCCA GATACCGATC AAGATGGAAA AGAAAACCGA
AAAGAATCCA GTGGGGTGTC GATTTGCCGG GCACGTGAAG GAAGATTGCC TTCTCGGGAT
CTTGGCGTGC CAAGAGAGGA CGTCTGGCAT AATGCGTTTT ATTATCGAGT GAATGCGCGA
TCGGAGAATA AAAAATACAT TAATGATCTT TGCCAATCCG CCAGCGTTTT TGGTCGTATG
GGTGAGCGAA CGTTGCCGAA TGGATCCGGT GTTTGCGAGA CAAGCAATCT CTTTTATTGT
CACTGCTCAT CGGCAAAATC CGATGGCGCT TGCCTCGGAA ATTGTCGTTT TTCTGAAGAC
CCCAGGCCGG GTGACTTTTC ACCGTATTTC GTACTTGAAA CGCCGCCAAA CGGCGTGGAT
GAAGCGGATT CCTTAAAGAA TATGAAAGTC ATTGATGAGA AGCAGGAAGA AATTGATAAT
GGCATTGTGG CAATGGTGGT GTCGTTTGGA CAAAATGGAT TGCAAACTTG GGATGATTGT
TTATCTGCCA CCACGTCTGG CACAGCGGAG CGCGAGAATT GTGATGGTGA TCAATCGGGG
GTGTTTCAAA TTAACCGTTC TGGTGAGATG GATGACTATT TAACTTGGAT AAATATGTAT
GACGCTAAGC ATGCTTTGCT TGAAGTAAGA GGGTTTTCAG GTGAATAA
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| Protein sequence | MNQSSIRQKG FTLIEMAFAL LLIGLIVGGG LSFLGSFHQV ENSKIAEKQM LEIKQAMLTY
LKVNKHLPCP DTDQDGKENR KESSGVSICR AREGRLPSRD LGVPREDVWH NAFYYRVNAR
SENKKYINDL CQSASVFGRM GERTLPNGSG VCETSNLFYC HCSSAKSDGA CLGNCRFSED
PRPGDFSPYF VLETPPNGVD EADSLKNMKV IDEKQEEIDN GIVAMVVSFG QNGLQTWDDC
LSATTSGTAE RENCDGDQSG VFQINRSGEM DDYLTWINMY DAKHALLEVR GFSGE
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