Gene Tcr_0461 details

Gene Information

• Locus tag: Tcr_0461
• Symbol: rplM
• ID: 3761562
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 517202
• End bp: 517630
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637785172
• Product: 50S ribosomal protein L13
• Protein accession: YP_390731
• Protein GI: 78484806
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0000000797457
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAACAT TTGTTGCAAA ACCAGCTGAA GTAAAACGTG ACTGGTATAT TGTTGACGCT 
GAAGGTAAAA CTTTAGGTCG TATGGCTGCA GAAATTGCAG CACGTCTACG TGGAAAGCAC 
AAGCCAGAAT ATACGCCTCA TGTTGATTGT GGTGATTATA TTGTGGTGAT CAATGCCGAA 
AAAATTGCTG TTACAGGTAA TAAGCGTACA GACAAAATGT ATCATCACGT AACAGGGTAT 
GTTGGTAACT TAAAATCAAC AAACTTTGAA ACGCTTGTTG GTAGCAAGCC GACTCGTCCA 
GTTGAGTTTG CCATTAAGGG AATGTTGCCT CGTGGTCCTC TAGGCCGTGC AATGTTGAAA 
AAACTGAAAG TGTATGCGGG TGCAGAGCAT CCTCATGCTG CACAGCAACC TAAAGAACTA 
GACTTGTAA 

 

Protein sequence

MKTFVAKPAE VKRDWYIVDA EGKTLGRMAA EIAARLRGKH KPEYTPHVDC GDYIVVINAE 
KIAVTGNKRT DKMYHHVTGY VGNLKSTNFE TLVGSKPTRP VEFAIKGMLP RGPLGRAMLK 
KLKVYAGAEH PHAAQQPKEL DL