| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0457 |
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| Symbol | |
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| ID | 3761484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 514339 |
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| End bp | 515388 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637785168 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_390727 |
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| Protein GI | 78484802 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.163256 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCAT CGCAATTAAT CCAAAGCCCT TGTCGTTATA GCTTCTCGAA GGAAGAAGCT
CGCGAATTAG CCGAACAAAC GCTAGAAAAA CTCAATCATC ATGACATCAG TGCGAATCCT
ATCCATTTCA CACTTTTCTT TGAACTCTTA ACGTCAATCA ATCCCAGTAT CGCAGAACAA
GTTGAGCACG CATTACAATT TAAAACGTAT AACGACGACT CAGCTCGCGT CATGTTCAAT
GCACTTTGGA GTGAAATCAT CAGTCATAGT TTACACTCTG AAGAGTTTTC AGAGATTGTG
GATAATTTAA TTTTATATAT CGACAATTGG ATTAAAGCCG CCCAAAACAA GTCAGACACC
ATCAGCGCCG AAGTCGAGAA AGTATCACAA CTCAGCACAG CGCAAGAGAT GATTGATCGC
CTGAAATCCA ATGTATTGCC TGCCATAGCA TCTTACCAGT CTGAAACGAA TGCTTTACAA
GAGCAGATTC AAGATTCAAG CGCCGAAATT ATGCGACTCA AAAAAGAGCT CGACAAGGCC
ACGGCCATTG CTAAAACCGA TGAATTGACT AACATTCCTA ATCGACGTGG CTTTAATGAA
ATCATTGAAA ACATGATGAA AGAAGCCAAC GAAAAACAAA GCAGTTTTGC ACTGTTAGTA
TTGGACATTG ATTTCTTTAA AAAAGTTAAT GATACCTATG GGCATTTGGT TGGGGACAGC
ATTTTAAGAT ACCTCGCCAA AAGCCTGCAT AACGAAACCA AAGGAAAAGA TTCAATTGCA
CGTATCGGGG GCGAAGAGTT TGTGGCCATT TTACCGAGCA CCAGCTACGA CTCGGCTTTA
AAATTAGCCA ACACCATTCG TGAAAAAATT GCTTCACGCC CGCTTCATGT CAAAAATAAT
GCAAACCCGA TTACCCTGAC TATTTCAATA GGTGTAGCCA TGTTCCAGCT CAATGAAACA
TTAGACTCAC TCTTTACGCG AGCAGATAAA TGCCTTTACA TGGCTAAATC AAATGGCCGA
AATCGAGTGT ATGGTGAAGC CGAATTATAA
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| Protein sequence | MNSSQLIQSP CRYSFSKEEA RELAEQTLEK LNHHDISANP IHFTLFFELL TSINPSIAEQ
VEHALQFKTY NDDSARVMFN ALWSEIISHS LHSEEFSEIV DNLILYIDNW IKAAQNKSDT
ISAEVEKVSQ LSTAQEMIDR LKSNVLPAIA SYQSETNALQ EQIQDSSAEI MRLKKELDKA
TAIAKTDELT NIPNRRGFNE IIENMMKEAN EKQSSFALLV LDIDFFKKVN DTYGHLVGDS
ILRYLAKSLH NETKGKDSIA RIGGEEFVAI LPSTSYDSAL KLANTIREKI ASRPLHVKNN
ANPITLTISI GVAMFQLNET LDSLFTRADK CLYMAKSNGR NRVYGEAEL
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