Gene Tcr_0455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0455 
Symbol 
ID3761482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp509851 
End bp513168 
Gene Length3318 bp 
Protein Length1105 aa 
Translation table11 
GC content46% 
IMG OID637785166 
Productacriflavin resistance protein 
Protein accessionYP_390725 
Protein GI78484800 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGTA CAGGTGAAAA ACAAACTTCA GATTTAAACA TTGCAGGGAA GCTAGCGAAA 
GCGTTTATTC ATTCGAAGAT TACCATGATG ATTATGGTCG CGGTCACTTT GGCTGGGGCT
TTAGCGTATA TGGTGACGCC ACGGGAGTAT AACCCCCAGA TTGTTGTGCC TGCGGCAAAT
ATCATTGTGC CAAAAGGCGG TGCGACGCCA AGCGAAGTGC AGAACATGGT GGTCAAGCCG
CTTGAAACCA TTATGGGCGC TTTACCGGGT GTAAAACATA CCTTTGGGTA TGCCTCTAAT
GATTTTGGTG TGGTGACGGT TCAATTTGAT GTGGGTGAGA ACCAGGTGGA TAGCTTGGTG
AAGCTGTATA ACCAGCTCAT GCAAAATATG GATAAGATGC CACCAGATAC CCAGCAGCCG
TTGATTAAAC CTATTAATGT TGATGATGTG CCGATTTTAA CCCTGGCCGT CACATCGGAT
GAGCTGTCGG GCTATGATCT TCGTGATATC TCGCTTAAGT TGGTAGAGAA TTTGCGTAAC
ACTCCGGGCG TGTCTTTTAC TGACGTGGTT GGTGGAAAGA AGCGCGCGGT GAATGTTTGG
TTGGATGCGC AAAAAATCGC CCTAACCGGA ATGTCTTTAG AGCAAATCAG TAAAATGTTA
AAAGGCAGTA ATGTCTCCTT GCCGGTCGGC TCGCTGGTCA GCAATAATGA AAGCCACCCT
ATTCGAGTTA ATGGCTTTTT GGGCAACGCC GAAGAAGTGG GTGAAATTAT TATTGGGATG
GAAAAAGGCC GTCCTATTTA CTTAAAAGAC ATCGCTCGAA TTGAAGACGG CCCAAAAGAA
ACCGATACGG ATACACGGAT TGGGTATGGT GTGGCTTCTG AACAATCCGC AAGAGGCGAA
CGACCTGCGG TAACGATATC GGTGGCCAAA AAACCTGGAA CGAATGCCGT GACGGTTGCA
GATGCTGTGT TGGATAAGTT GCATGAGCTG AAAAAAAGTA CTTTGCCGGC CAATGTTGAA
GTGTTTGTCA CGCGTAACGA TGGTGAAAAA GCCAACGCTG CTGTGAACCT GCTGATGGAG
CATTTGGCGA TTGCGGTTGC CTCAGTGATT GTCGTGATGG TGTTGTTTTT AGGGTGGCGC
GAAGCCGGAA TTGTAACGTT AACTGTGCCT TTGATTTTGT TTGTGGTGCT CTTTGTCGGC
TATGTTTCTG GGCAAACCAT TAACCGAATT ACGTTATTTG CGTTGATTTT ATCATTAGGG
TTGCTGGTGG ATGCCGCGAT TGTGGTTATT GAGAATATAC ACCGGCATAT CCATGATGGG
TTTGATCCGG AAAAATTTGA TGAAGTCTTA ATCCGAGCCA CGAATGAAAT TGGTAACCCA
ACCAATGTGG CCACTTTTGC GGTTATTCTG GCCTTTATTC CAATGATGTT TGTCACCGGG
ATGATGGGAC CCTTTATGGC GCCGATTCCG TTTAATGTGC CCGTTGCAAT GATCGCATCA
CTGTTGATTG CTTATATCTT GGTGCCGTAT GCTTCTTATC GCTTTTTAGG TAAGAAGGCA
TTGAAAGAAA TGAAAGAGCG TGAAAGCCTC GCGTCTCATC ATGTGACAAA GCCAGACTGG
ATGCAGTCGT TGTATGAAAA ATCGATTGTG CCAATGCTGG AGAGTCGTAC CAAGCGTAAC
GTGTTCTTGT CTGTTGTGTT AATTTCACTG TTTGCGGCTA TGGTTCAACC CGCACTGCAA
TTCTTGCGCG GTGATGGCAT GAACAACCCA CTGCATTCCG CGGGGGTTGA AGTGAAAATG
CTGCCTTATG ACAACACCAG TACCTTTTTG GTTCAGGTTG ATATGCCTGA AGGTACGGCC
CTTGAAGCAA CGGATATTGT TGTTCGCCGA GTGAATGACG TGATTGCGAA CACTCCGTTT
GTGACGGATT ACAGTGTTTA CTTGGGAGAT CATGCCCCAA TTGATTTTGC CGCGCTTGTG
CGTGGAGATT TGATTAAAGA AGGGTCTAAC TTTGCGCAGA TTCGTGTCAA TCTGGTGAAT
AAACATGACC GAGATTTAAC TTCTCATGAA ATTGTGCAAT TGTTGGATAA AAGGTTGGCA
TCGCTTAAAA AGGTGTTTCC TAATGCCAAT ATCAAGCTCT ATGAAACGCC TCCGGGGCCT
CCTGTGACCA CTCAGGTCAT GGCAGAACTG TACGGGCCGG ATTATGATAA ATTGAGAACG
GCGGCCAAAG AAATTAATGC CAAAATGTAT GATATCTATG GATTGTCTAA TATTGATGAC
AGTGTGACGG CAACCACAAG CAGTTATCAA ATTAATATTG ATCGTACACA AGCGAACCTA
CTGGGAATTG TTCCCGCAGA AGTTGCGAAA ATGTTGCGTG ATTATATTAA CGGCTTTGAG
CTGGGGTATA TGCATTTGGA TAATGTGCGC GAGCCGGTCA ATATTATTGT GCGCTTGCCA
CGTTCTGAAA GAACGGTGCC TGAGCAGTTA TTGTCGTTAA ATGTGCAGTC ACGAGCTGGA
GATTCGGTGC CGATTTCTGC GTTTGCTAAA ATCAAAGAAG TACCGCAAGC GAAACCGATT
ATCGGTCGTG ATCAACATCA GATGGTGATG GTAGGGGGAG AACTGCTACG TTCTAGCCCT
GTGTACGCGG TCCTGTCTTT AGATGGTATG TTGGATGGGG TGAAGTTGCC GGAATCCAAT
GTGACTTTCC ATACGGCTAA TCTTGGGTTT GTGGAAGCAC AGCCGGAAGA TGTCATGGGG
TACACGTTAT TATGGGGCGG TGAAATGCGC CTTACATTAG ATGTTTTCCG TGATATGGGA
AGTGCGTTTA TTGTGGCGCT GGTTTTTATC TACTTGATTT TAGTCGGTTA TTATCGATCC
TTTATGATGC CTGTAATTGT CATGGGTGCC ATTCCATTAA CGATGATTGG GGTGTTCCCT
GGCCATTGGT TGACGGGGCA GGCATTTACC GCGACGTCAA TGATTGGGGT GATTGCTCTA
GCCGGGATAG TGGTACGAAA TTCCTTGTTG TTAATTGATT TTATTCTGGA GTACCGTCAA
GAAGGTAAAA CTCTGAAAGA CTCGGTGATC GAGGCAGGGA AAGTTCGATT CCGTCCTATC
CTGTTAACCG CATTAGCTAT TATGTTCGGG TCCATGATTA TGATCACCGA TCCGGTCTTT
GGTGGATTGG CGGTCTCATT GATCTTTGGA ACCTTGTCTT CAACCGTCTT GACCTTGCTT
GTCATTCCAT TGCTTTACTT TATTTGGCAG TGGCATTCAG GGGTAAAATA CACCGAAGGC
AATCAAATTA AGCCATAG
 
Protein sequence
MSSTGEKQTS DLNIAGKLAK AFIHSKITMM IMVAVTLAGA LAYMVTPREY NPQIVVPAAN 
IIVPKGGATP SEVQNMVVKP LETIMGALPG VKHTFGYASN DFGVVTVQFD VGENQVDSLV
KLYNQLMQNM DKMPPDTQQP LIKPINVDDV PILTLAVTSD ELSGYDLRDI SLKLVENLRN
TPGVSFTDVV GGKKRAVNVW LDAQKIALTG MSLEQISKML KGSNVSLPVG SLVSNNESHP
IRVNGFLGNA EEVGEIIIGM EKGRPIYLKD IARIEDGPKE TDTDTRIGYG VASEQSARGE
RPAVTISVAK KPGTNAVTVA DAVLDKLHEL KKSTLPANVE VFVTRNDGEK ANAAVNLLME
HLAIAVASVI VVMVLFLGWR EAGIVTLTVP LILFVVLFVG YVSGQTINRI TLFALILSLG
LLVDAAIVVI ENIHRHIHDG FDPEKFDEVL IRATNEIGNP TNVATFAVIL AFIPMMFVTG
MMGPFMAPIP FNVPVAMIAS LLIAYILVPY ASYRFLGKKA LKEMKERESL ASHHVTKPDW
MQSLYEKSIV PMLESRTKRN VFLSVVLISL FAAMVQPALQ FLRGDGMNNP LHSAGVEVKM
LPYDNTSTFL VQVDMPEGTA LEATDIVVRR VNDVIANTPF VTDYSVYLGD HAPIDFAALV
RGDLIKEGSN FAQIRVNLVN KHDRDLTSHE IVQLLDKRLA SLKKVFPNAN IKLYETPPGP
PVTTQVMAEL YGPDYDKLRT AAKEINAKMY DIYGLSNIDD SVTATTSSYQ INIDRTQANL
LGIVPAEVAK MLRDYINGFE LGYMHLDNVR EPVNIIVRLP RSERTVPEQL LSLNVQSRAG
DSVPISAFAK IKEVPQAKPI IGRDQHQMVM VGGELLRSSP VYAVLSLDGM LDGVKLPESN
VTFHTANLGF VEAQPEDVMG YTLLWGGEMR LTLDVFRDMG SAFIVALVFI YLILVGYYRS
FMMPVIVMGA IPLTMIGVFP GHWLTGQAFT ATSMIGVIAL AGIVVRNSLL LIDFILEYRQ
EGKTLKDSVI EAGKVRFRPI LLTALAIMFG SMIMITDPVF GGLAVSLIFG TLSSTVLTLL
VIPLLYFIWQ WHSGVKYTEG NQIKP