Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0455 |
Symbol | |
ID | 3761482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 509851 |
End bp | 513168 |
Gene Length | 3318 bp |
Protein Length | 1105 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637785166 |
Product | acriflavin resistance protein |
Protein accession | YP_390725 |
Protein GI | 78484800 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAGTA CAGGTGAAAA ACAAACTTCA GATTTAAACA TTGCAGGGAA GCTAGCGAAA GCGTTTATTC ATTCGAAGAT TACCATGATG ATTATGGTCG CGGTCACTTT GGCTGGGGCT TTAGCGTATA TGGTGACGCC ACGGGAGTAT AACCCCCAGA TTGTTGTGCC TGCGGCAAAT ATCATTGTGC CAAAAGGCGG TGCGACGCCA AGCGAAGTGC AGAACATGGT GGTCAAGCCG CTTGAAACCA TTATGGGCGC TTTACCGGGT GTAAAACATA CCTTTGGGTA TGCCTCTAAT GATTTTGGTG TGGTGACGGT TCAATTTGAT GTGGGTGAGA ACCAGGTGGA TAGCTTGGTG AAGCTGTATA ACCAGCTCAT GCAAAATATG GATAAGATGC CACCAGATAC CCAGCAGCCG TTGATTAAAC CTATTAATGT TGATGATGTG CCGATTTTAA CCCTGGCCGT CACATCGGAT GAGCTGTCGG GCTATGATCT TCGTGATATC TCGCTTAAGT TGGTAGAGAA TTTGCGTAAC ACTCCGGGCG TGTCTTTTAC TGACGTGGTT GGTGGAAAGA AGCGCGCGGT GAATGTTTGG TTGGATGCGC AAAAAATCGC CCTAACCGGA ATGTCTTTAG AGCAAATCAG TAAAATGTTA AAAGGCAGTA ATGTCTCCTT GCCGGTCGGC TCGCTGGTCA GCAATAATGA AAGCCACCCT ATTCGAGTTA ATGGCTTTTT GGGCAACGCC GAAGAAGTGG GTGAAATTAT TATTGGGATG GAAAAAGGCC GTCCTATTTA CTTAAAAGAC ATCGCTCGAA TTGAAGACGG CCCAAAAGAA ACCGATACGG ATACACGGAT TGGGTATGGT GTGGCTTCTG AACAATCCGC AAGAGGCGAA CGACCTGCGG TAACGATATC GGTGGCCAAA AAACCTGGAA CGAATGCCGT GACGGTTGCA GATGCTGTGT TGGATAAGTT GCATGAGCTG AAAAAAAGTA CTTTGCCGGC CAATGTTGAA GTGTTTGTCA CGCGTAACGA TGGTGAAAAA GCCAACGCTG CTGTGAACCT GCTGATGGAG CATTTGGCGA TTGCGGTTGC CTCAGTGATT GTCGTGATGG TGTTGTTTTT AGGGTGGCGC GAAGCCGGAA TTGTAACGTT AACTGTGCCT TTGATTTTGT TTGTGGTGCT CTTTGTCGGC TATGTTTCTG GGCAAACCAT TAACCGAATT ACGTTATTTG CGTTGATTTT ATCATTAGGG TTGCTGGTGG ATGCCGCGAT TGTGGTTATT GAGAATATAC ACCGGCATAT CCATGATGGG TTTGATCCGG AAAAATTTGA TGAAGTCTTA ATCCGAGCCA CGAATGAAAT TGGTAACCCA ACCAATGTGG CCACTTTTGC GGTTATTCTG GCCTTTATTC CAATGATGTT TGTCACCGGG ATGATGGGAC CCTTTATGGC GCCGATTCCG TTTAATGTGC CCGTTGCAAT GATCGCATCA CTGTTGATTG CTTATATCTT GGTGCCGTAT GCTTCTTATC GCTTTTTAGG TAAGAAGGCA TTGAAAGAAA TGAAAGAGCG TGAAAGCCTC GCGTCTCATC ATGTGACAAA GCCAGACTGG ATGCAGTCGT TGTATGAAAA ATCGATTGTG CCAATGCTGG AGAGTCGTAC CAAGCGTAAC GTGTTCTTGT CTGTTGTGTT AATTTCACTG TTTGCGGCTA TGGTTCAACC CGCACTGCAA TTCTTGCGCG GTGATGGCAT GAACAACCCA CTGCATTCCG CGGGGGTTGA AGTGAAAATG CTGCCTTATG ACAACACCAG TACCTTTTTG GTTCAGGTTG ATATGCCTGA AGGTACGGCC CTTGAAGCAA CGGATATTGT TGTTCGCCGA GTGAATGACG TGATTGCGAA CACTCCGTTT GTGACGGATT ACAGTGTTTA CTTGGGAGAT CATGCCCCAA TTGATTTTGC CGCGCTTGTG CGTGGAGATT TGATTAAAGA AGGGTCTAAC TTTGCGCAGA TTCGTGTCAA TCTGGTGAAT AAACATGACC GAGATTTAAC TTCTCATGAA ATTGTGCAAT TGTTGGATAA AAGGTTGGCA TCGCTTAAAA AGGTGTTTCC TAATGCCAAT ATCAAGCTCT ATGAAACGCC TCCGGGGCCT CCTGTGACCA CTCAGGTCAT GGCAGAACTG TACGGGCCGG ATTATGATAA ATTGAGAACG GCGGCCAAAG AAATTAATGC CAAAATGTAT GATATCTATG GATTGTCTAA TATTGATGAC AGTGTGACGG CAACCACAAG CAGTTATCAA ATTAATATTG ATCGTACACA AGCGAACCTA CTGGGAATTG TTCCCGCAGA AGTTGCGAAA ATGTTGCGTG ATTATATTAA CGGCTTTGAG CTGGGGTATA TGCATTTGGA TAATGTGCGC GAGCCGGTCA ATATTATTGT GCGCTTGCCA CGTTCTGAAA GAACGGTGCC TGAGCAGTTA TTGTCGTTAA ATGTGCAGTC ACGAGCTGGA GATTCGGTGC CGATTTCTGC GTTTGCTAAA ATCAAAGAAG TACCGCAAGC GAAACCGATT ATCGGTCGTG ATCAACATCA GATGGTGATG GTAGGGGGAG AACTGCTACG TTCTAGCCCT GTGTACGCGG TCCTGTCTTT AGATGGTATG TTGGATGGGG TGAAGTTGCC GGAATCCAAT GTGACTTTCC ATACGGCTAA TCTTGGGTTT GTGGAAGCAC AGCCGGAAGA TGTCATGGGG TACACGTTAT TATGGGGCGG TGAAATGCGC CTTACATTAG ATGTTTTCCG TGATATGGGA AGTGCGTTTA TTGTGGCGCT GGTTTTTATC TACTTGATTT TAGTCGGTTA TTATCGATCC TTTATGATGC CTGTAATTGT CATGGGTGCC ATTCCATTAA CGATGATTGG GGTGTTCCCT GGCCATTGGT TGACGGGGCA GGCATTTACC GCGACGTCAA TGATTGGGGT GATTGCTCTA GCCGGGATAG TGGTACGAAA TTCCTTGTTG TTAATTGATT TTATTCTGGA GTACCGTCAA GAAGGTAAAA CTCTGAAAGA CTCGGTGATC GAGGCAGGGA AAGTTCGATT CCGTCCTATC CTGTTAACCG CATTAGCTAT TATGTTCGGG TCCATGATTA TGATCACCGA TCCGGTCTTT GGTGGATTGG CGGTCTCATT GATCTTTGGA ACCTTGTCTT CAACCGTCTT GACCTTGCTT GTCATTCCAT TGCTTTACTT TATTTGGCAG TGGCATTCAG GGGTAAAATA CACCGAAGGC AATCAAATTA AGCCATAG
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Protein sequence | MSSTGEKQTS DLNIAGKLAK AFIHSKITMM IMVAVTLAGA LAYMVTPREY NPQIVVPAAN IIVPKGGATP SEVQNMVVKP LETIMGALPG VKHTFGYASN DFGVVTVQFD VGENQVDSLV KLYNQLMQNM DKMPPDTQQP LIKPINVDDV PILTLAVTSD ELSGYDLRDI SLKLVENLRN TPGVSFTDVV GGKKRAVNVW LDAQKIALTG MSLEQISKML KGSNVSLPVG SLVSNNESHP IRVNGFLGNA EEVGEIIIGM EKGRPIYLKD IARIEDGPKE TDTDTRIGYG VASEQSARGE RPAVTISVAK KPGTNAVTVA DAVLDKLHEL KKSTLPANVE VFVTRNDGEK ANAAVNLLME HLAIAVASVI VVMVLFLGWR EAGIVTLTVP LILFVVLFVG YVSGQTINRI TLFALILSLG LLVDAAIVVI ENIHRHIHDG FDPEKFDEVL IRATNEIGNP TNVATFAVIL AFIPMMFVTG MMGPFMAPIP FNVPVAMIAS LLIAYILVPY ASYRFLGKKA LKEMKERESL ASHHVTKPDW MQSLYEKSIV PMLESRTKRN VFLSVVLISL FAAMVQPALQ FLRGDGMNNP LHSAGVEVKM LPYDNTSTFL VQVDMPEGTA LEATDIVVRR VNDVIANTPF VTDYSVYLGD HAPIDFAALV RGDLIKEGSN FAQIRVNLVN KHDRDLTSHE IVQLLDKRLA SLKKVFPNAN IKLYETPPGP PVTTQVMAEL YGPDYDKLRT AAKEINAKMY DIYGLSNIDD SVTATTSSYQ INIDRTQANL LGIVPAEVAK MLRDYINGFE LGYMHLDNVR EPVNIIVRLP RSERTVPEQL LSLNVQSRAG DSVPISAFAK IKEVPQAKPI IGRDQHQMVM VGGELLRSSP VYAVLSLDGM LDGVKLPESN VTFHTANLGF VEAQPEDVMG YTLLWGGEMR LTLDVFRDMG SAFIVALVFI YLILVGYYRS FMMPVIVMGA IPLTMIGVFP GHWLTGQAFT ATSMIGVIAL AGIVVRNSLL LIDFILEYRQ EGKTLKDSVI EAGKVRFRPI LLTALAIMFG SMIMITDPVF GGLAVSLIFG TLSSTVLTLL VIPLLYFIWQ WHSGVKYTEG NQIKP
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