Gene Tcr_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0440 
Symbol 
ID3761259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp493629 
End bp493892 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content39% 
IMG OID637785151 
ProductFis family transcriptional regulator 
Protein accessionYP_390710 
Protein GI78484785 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG2901] Factor for inversion stimulation Fis, transcriptional activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTAC TATCTGATAA AAATCCAGCC AGCCAAGCAC TCAGCACGCA TGTCACCATG 
ACGCTGAAAA ACTATTTTGA AACGCTGGAA GGTGAAGTAC CGAGTGATGT TTATCAAATG
GTGATAAGCC AAGTGGAACG CCCGCTCATT GAGTTTGTTT TAAACGAGAC CGCGTTTAAT
CAAAGTCGAT CAGCCGAAAT ATTAGGTATT AACCGAAATA CCTTAAGAAA GAAAATGCAG
CTTTATAAAA TAACACCTGC ATAA
 
Protein sequence
MTLLSDKNPA SQALSTHVTM TLKNYFETLE GEVPSDVYQM VISQVERPLI EFVLNETAFN 
QSRSAEILGI NRNTLRKKMQ LYKITPA