Gene Tcr_0436 details

Gene Information

• Locus tag: Tcr_0436
• ID: 3761255
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: -
• Start bp: 489419
• End bp: 490201
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637785147
• Product: hypothetical protein
• Protein accession: YP_390706
• Protein GI: 78484781

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.0378114
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATTCTG AGATTTTGAT GCCCGTTTAT AAAACAGCAA GTTTACTAAG TTTATCAACT 
CTGCTTTTCC TTATCGTTTC CTTGCCTGCC AAAGCGATTC AGGCAGATGA ACTGGTTCGC 
CACATTGATA GTCTATGGCG AGGAACGACC TCCCACGCTT TTATGACCAT GAGTGTCAAA 
ACACAACGCT ACCAACGCAA CATGACAATG GAAGCTTGGT CTCTCGGCAA TGATTATTCT 
TTGGTTGTCA TTCAAAAACC CATTAAAGAT CGAGGCATTT CGACTTTAAA AGTGGAACAA 
AACATCTGGA ACTACTTACC CAAAATCAAC CGTGTCACCA AAGTACCGTC AAGCATGATG 
TCCGGCTCTT GGATGGGAAG CCACTTCACC AATGATGATC TCGTGAAGGA AAGCACCTTT 
GAACAGGATT ATGATTCGAC CATCACATTT GAAGGGCTTC GAAACAATCA AAAAATATAT 
GAATTGACCT CTACCCCAAA ACCGAATGCC GCGGTCGTTT GGGGAAAAGT TGTGATGCAG 
ATTACGCAAG AAACCTTGGC CCCTATTAGA GGGCTTTACT ATGATGAAGA CGGTCAACTT 
ATTCGTACCT TAACATTTGA CCAAGTTCAA AAAATCGATG AGCGAAGTGT TCCCATGCGA 
ATGACATTAC AGCCAATGGA CAAGCCAACA GAATCAACCG TCATTCTCTA CAACGACATT 
CAATTCGATA TTCCGCTAAC CAAAAACTTT TTTTCATTAA GAAATCTTAA ACAGCGGCAT 
TAA 

 

Protein sequence

MHSEILMPVY KTASLLSLST LLFLIVSLPA KAIQADELVR HIDSLWRGTT SHAFMTMSVK 
TQRYQRNMTM EAWSLGNDYS LVVIQKPIKD RGISTLKVEQ NIWNYLPKIN RVTKVPSSMM 
SGSWMGSHFT NDDLVKESTF EQDYDSTITF EGLRNNQKIY ELTSTPKPNA AVVWGKVVMQ 
ITQETLAPIR GLYYDEDGQL IRTLTFDQVQ KIDERSVPMR MTLQPMDKPT ESTVILYNDI 
QFDIPLTKNF FSLRNLKQRH