Gene Tcr_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0430 
Symbol 
ID3761249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp481938 
End bp484271 
Gene Length2334 bp 
Protein Length777 aa 
Translation table11 
GC content43% 
IMG OID637785141 
Productvon Willebrand factor, type A 
Protein accessionYP_390700 
Protein GI78484775 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4548] Nitric oxide reductase activation protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.898642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTTG ATATTGAAGA AGTCAAAGCA TCCTTGATTG AAAGTGTGCC ACAACTGGAA 
GAAATGCTTG ATTCATTGAT TCAAGAAGCT TCGCATTATA TGAATGAAGC CTCTCGTGAA
ACATGGTTGC AAAACGCACA AGGAATTGCT TACCTAGGAA AAGGTCAACA GGTTGTCGTT
AGCTATCTTG AGGCGGTGCC GCAAGTTATT GCTAGGATTG ATGATGAGAT TCTGGATGAT
ATCCTTGAAA CCGTCATGAA ATTGTCTTCG GTGACCTCTG GAGAAGTGGT GTCTCTTGTA
TTGGATTCTT TGCCTGTTGT GTCTGAAAGA ACAGGAGATA TCGACCTTTT AAGACAATAT
TTATCGCTCG TTTACCAGAT TGGTTCCAAA ACGCCACGCG GAATGCGTCC GATGTTGAGC
AATATTGACG AGTTGATGTC AAAACTGACT GTTTCAGGCT TAAGACGCTG GGCACAGTGG
GGTGCGCAAG CGCATGCTCG AAACTTCCAA GCTCAGATTG ATTACTTCGG ACTGGTATCT
GAAGATTCCA AAGCGGTTTT CCAGCAACAG CGTAAAGGCT CGTTGTTCAT CGATTATCAT
CGACCAATCA ATTTTTATTT GAGAGCTTTC TGGGCGCGTG ATTTCTTTAT TCGTCCTGCG
GCGGCGGATT ATGATGATTT TAAGCCTTAT TTTGAAAATA TGGCCATGCA TTTGCCGGAT
GCCTTGAATG ATTTAGGCGA GATCAAGGGG GGCGAATTGT ATCGTGCAAT GGCCGCCCAT
ATGGCATCGC ATTTAGCGTA TACCAAAGAA GCCATTTCGA TGGAGCAGTT GAATCCTCAG
CAAATGTTCT TTATTGAGTT GATTGAAGAT GCGCGTGTGG AATATAACGC CATTAAAAAT
TTCCCAGGCC TGAAGGGGTT GTGGAAAAAA GTCATAAAAG CCAGTATGGA AGCTTCCGAA
TTGCCTGAAA AGTCGACCGC TTATCGCTTA GAACAGCTTG CATTGAAATT GATGGATGTT
AAACATGATT TGCAAGATGA GCAAATGATG GTGGTGGCTG AACGTTTCCA TAATGAAATT
GAAGAGAATC TGGACAACGA GAAGTGGTCT TGGGATTTAG GAATTCTGCT TTACAATGTT
TTGAATAAAG CGACCTCTAA GTGGGAATCT CTTACGGACA TCAGTCAACA ACGTTTTGGC
TATCGTGATG ACAACCGTTT GGTTTGGGCA TCCGAAGAAT GGGCCGAAAT GGAAGGGGGC
GGTGCGCCAC ATCAAGAAAC CGTTCGTAAA AATGTTTCAT TGATGGAAAT GATCAATGAA
ATTGATTCTG AACTGGTGGA TGTGGATCAT GAAGAGGTTT GGGTACTAGG CTCTGAGCTT
TATCCTTATG AAGATAATGG ACTGTCTTAT AATGAGATGG AAGGCATTGA GCCCGTTTCA
GATCCTTTCC ATTATCATGA GTGGGATTAT CGTGTTCAGT TGAATCGTCC AAACTGGGTC
ACGCTGTATG AGCATCGTGC GAAAAAAGGC GACCCTCAGT TATATAACCG AATTCTAGAT
CAGAATAAAG GAATTGCGCA TCGTATTAAG CAAATCGTTG ATAAGTTGCA AGCGGTTGGT
TTACAGCGTA TTCGCCGAAT TGAAGATGGA GACGAACTGG ATTTAAATGC CTGCGTTGAA
GCAATTACTT CAATTCGTAT GGGGCATGAA CCCGATCCAC GCATTACGAT GAAAAATGTG
ATTCGCAGCC GTGAAGTATC GGTGGTCGTG TTGCTTGATT TATCAGAATC GACCAATGAA
ATGGTTGATG GTGGCGATAA AACTGTTCTA GAAGTAACGC AGGAAGCGGC TATCTTGGTG
TCGCATGCCA TCAATGGTAT CGGCGATAAG TTTGCTGTTC ATGGTTTCTC ATCAGATGGA
CGTCATGACT TGCAATACAC TCGATTCAAA CAGTTTGACG AACCTTTTGA TCAAGATGTT
CATTCACGTC TTGCGGGAAT GAAAGGTGGT CTCTCAACTC GTATGGGTGG CGCCATGCGA
CACGCGGGTA GTTACCTAGA GAAACAATCC AGTAAGCAGA AGCTTTTGTT GGTCATTACC
GATGGCGAAC CAGCGGATAT TGACGAAAAA GACGGTCAAT ATTTAAAACA AGATGCGAAG
AAAGCCGTTG AAGAACTTCA GGCGAAAGGG GTTTATTCGT ATTGCTTAAC GATCGATCAG
TATGCCGATA AGTATGTGCA TAATATTTTT GGTCAAAACC GTTATGCGAT TGTGGATAAT
GTCTTGAAGC TACCTGAAAA ATTACCGCAA TTATTTGCAA ACTTAACCAC CTAA
 
Protein sequence
MSFDIEEVKA SLIESVPQLE EMLDSLIQEA SHYMNEASRE TWLQNAQGIA YLGKGQQVVV 
SYLEAVPQVI ARIDDEILDD ILETVMKLSS VTSGEVVSLV LDSLPVVSER TGDIDLLRQY
LSLVYQIGSK TPRGMRPMLS NIDELMSKLT VSGLRRWAQW GAQAHARNFQ AQIDYFGLVS
EDSKAVFQQQ RKGSLFIDYH RPINFYLRAF WARDFFIRPA AADYDDFKPY FENMAMHLPD
ALNDLGEIKG GELYRAMAAH MASHLAYTKE AISMEQLNPQ QMFFIELIED ARVEYNAIKN
FPGLKGLWKK VIKASMEASE LPEKSTAYRL EQLALKLMDV KHDLQDEQMM VVAERFHNEI
EENLDNEKWS WDLGILLYNV LNKATSKWES LTDISQQRFG YRDDNRLVWA SEEWAEMEGG
GAPHQETVRK NVSLMEMINE IDSELVDVDH EEVWVLGSEL YPYEDNGLSY NEMEGIEPVS
DPFHYHEWDY RVQLNRPNWV TLYEHRAKKG DPQLYNRILD QNKGIAHRIK QIVDKLQAVG
LQRIRRIEDG DELDLNACVE AITSIRMGHE PDPRITMKNV IRSREVSVVV LLDLSESTNE
MVDGGDKTVL EVTQEAAILV SHAINGIGDK FAVHGFSSDG RHDLQYTRFK QFDEPFDQDV
HSRLAGMKGG LSTRMGGAMR HAGSYLEKQS SKQKLLLVIT DGEPADIDEK DGQYLKQDAK
KAVEELQAKG VYSYCLTIDQ YADKYVHNIF GQNRYAIVDN VLKLPEKLPQ LFANLTT