Gene Tcr_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0412 
Symbol 
ID3761193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp461678 
End bp462298 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content47% 
IMG OID637785123 
Producthypothetical protein 
Protein accessionYP_390682 
Protein GI78484757 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.567346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTACA CCACGCCCGA ACTGAATATT TCTCAACTCT ATCCATTACT GGTTGGTGGC 
ATCATTCCTC GACCCATAGC CTGGGTCAGT ACTCAAAGTT CACGAGGCAT TGATAACTTA
GCGCCTTATT CGTTTTTCAG TGTGGCCAGT TGCACCCCGC CGGTTCTGAC GGTGACACAA
ATTAACGCAC AACCCGAGTC TGACAAAGAC ACCTTGCGCA ATTTGAAAGA CACACAAGAA
TGTGTCGTCA ACATTGTCAG TGCCGATCTA GCCGAAGTTA TGAATGCCTC CTGCGCGAAT
TACGACCAAA ATGTGAGTGA ATTTGAAGCG CTGAAAATTC CCGCCTGTGA GAGCCAAACG
GTCAATGCCA AAGGGGTTGC ACAAGCTAAG GTTCGCTATG AATGTCGCTT AAAAGAAGTC
ATTACCCTAT CTGACCAACC AGGCGGTGGA AAACTGATGT TACTGGATGT ACTTCATATC
TATGTCGATG ACACCCTGAT TCAGGACGGA ATGATTCAAT CTGACAAATT AAACGCTATT
GGGAAACTGG GTGGCAATGA GTATACCGAC GCCTCGGCCG ATTTTGAGCT TGCCAGACCG
GTTTTAGAGA CGAATACTTA G
 
Protein sequence
MHYTTPELNI SQLYPLLVGG IIPRPIAWVS TQSSRGIDNL APYSFFSVAS CTPPVLTVTQ 
INAQPESDKD TLRNLKDTQE CVVNIVSADL AEVMNASCAN YDQNVSEFEA LKIPACESQT
VNAKGVAQAK VRYECRLKEV ITLSDQPGGG KLMLLDVLHI YVDDTLIQDG MIQSDKLNAI
GKLGGNEYTD ASADFELARP VLETNT