Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0410 |
Symbol | |
ID | 3761191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 460496 |
End bp | 461047 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637785121 |
Product | ATP-dependent protease peptidase subunit |
Protein accession | YP_390680 |
Protein GI | 78484755 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.312402 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAC AAACCTTTCA CGGAACCACA ATTTTATGCG CCAAACGAAA CGGTGAAATG GTCATTGGAG GCGATGGTCA AGTCACGCTG GGACACGTTG TGATGAAAGG CAATGCCCGC AAAGTCCGCC GACTTTTCAA TGGCAAAATT CTGGCTGGTT TTGCCGGTGC AACCGCCGAT GCCTTTACGT TGTTTGAACG TTTTGAAGGC AAGCTGCAAA CGCACAACGG CCAGTTGATG CGCGCTGCGG TTGAAATGGC GAAAGACTGG CGTACCGATC GCGCTTTGCG CAAACTGGAA GCAATGATGC TGGTGGCCGA TGCCGACAAT ATGTTATTGA TTTCGGGGAC GGGCGACGTC ATTGAACCGG CACATGATTT TATTTCGATC GGTTCCGGTG GCAGCTACGC GCACTCCGCC GCGCAAGCCT TGATGGAAAA TACCGACTTA TCCGCCAAAG ATGTGGTGGA AAAAGCGTTG AATATTGCGG CCGATTTATG CATCTACACC AACCATAATT TAACCATTGA AAGCTTGAAT AAAGAGGACT AA
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Protein sequence | MSEQTFHGTT ILCAKRNGEM VIGGDGQVTL GHVVMKGNAR KVRRLFNGKI LAGFAGATAD AFTLFERFEG KLQTHNGQLM RAAVEMAKDW RTDRALRKLE AMMLVADADN MLLISGTGDV IEPAHDFISI GSGGSYAHSA AQALMENTDL SAKDVVEKAL NIAADLCIYT NHNLTIESLN KED
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