Gene Tcr_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0410 
Symbol 
ID3761191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp460496 
End bp461047 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content50% 
IMG OID637785121 
ProductATP-dependent protease peptidase subunit 
Protein accessionYP_390680 
Protein GI78484755 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.312402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAC AAACCTTTCA CGGAACCACA ATTTTATGCG CCAAACGAAA CGGTGAAATG 
GTCATTGGAG GCGATGGTCA AGTCACGCTG GGACACGTTG TGATGAAAGG CAATGCCCGC
AAAGTCCGCC GACTTTTCAA TGGCAAAATT CTGGCTGGTT TTGCCGGTGC AACCGCCGAT
GCCTTTACGT TGTTTGAACG TTTTGAAGGC AAGCTGCAAA CGCACAACGG CCAGTTGATG
CGCGCTGCGG TTGAAATGGC GAAAGACTGG CGTACCGATC GCGCTTTGCG CAAACTGGAA
GCAATGATGC TGGTGGCCGA TGCCGACAAT ATGTTATTGA TTTCGGGGAC GGGCGACGTC
ATTGAACCGG CACATGATTT TATTTCGATC GGTTCCGGTG GCAGCTACGC GCACTCCGCC
GCGCAAGCCT TGATGGAAAA TACCGACTTA TCCGCCAAAG ATGTGGTGGA AAAAGCGTTG
AATATTGCGG CCGATTTATG CATCTACACC AACCATAATT TAACCATTGA AAGCTTGAAT
AAAGAGGACT AA
 
Protein sequence
MSEQTFHGTT ILCAKRNGEM VIGGDGQVTL GHVVMKGNAR KVRRLFNGKI LAGFAGATAD 
AFTLFERFEG KLQTHNGQLM RAAVEMAKDW RTDRALRKLE AMMLVADADN MLLISGTGDV
IEPAHDFISI GSGGSYAHSA AQALMENTDL SAKDVVEKAL NIAADLCIYT NHNLTIESLN
KED