Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0409 |
Symbol | |
ID | 3761190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 459494 |
End bp | 460447 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637785120 |
Product | Phage integrase |
Protein accession | YP_390679 |
Protein GI | 78484754 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.383536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTGATT ATCAACGCTT TATCAAGCAA TTAAAGTTGG AAAACAAGTC CGAGCATACG ATCTCAAACT ATCAACGGGA CTTGATGGGC TTACTGGTGT TTTATTTAGG CGATTACCTT GAACAACCCC TAGACGAAAA AGCCCTTAAA AGTGACCAGG CCTGGGCATT TTTGGATCAA TTTGATGACT GGCAGGCCAT TAAGCTGCCG GTGTTGCAAG CTTTTATTGC GTTTCGTATG CAACAGGGCA TTGCCGCCCG CAGCATTGCG CGACAATTAT CCGCCATTCG AGCTTTCTAC GCGTTTTTGA TTGAGCAAGG CCGAGCCAAC CATAACCCGG CAAAAGGGTT GAAAGCGCCA AAACAGCCCA AAGCGTTGCC TAAAAGTTTG GATGTAGATT TAACACGCCA GCTATTGGAG CAACCTCTGA AAACCTGGCA GGATGTGCGC GATCAAGCCA TTTTTGAAAT TCTGTATTCC GGTGGGTTGC GGGTTTCGGA GCTGGTAGAA CTGGACTTAT CACCGGGATT GGATGGCTTA GCGTCTGGCT GGGTTCGAGT GCTCGGGAAA GGGCAGAAAG AACGAGATGC TCCTGTCGGA CAGCCGGCAC AAAAAGCATT GCATCGTTGG CTTGAGATTC GATCAGACTA TGCCCAGCCG GGAGAGCAAG CCGTTTTCGT CAACCGATTT GGGAAGCGAC TAGGGGTCAG AAGCATTCAA ACACAACTGG ATAAACGAAC CTTACAGGCG GGGTTGCCTA CCAAAATGTC GCCCCATAGA TTGCGGCACG CCTGTGCAAC GCATGTGTTA GAATCTAGCG GAGATTTAAG GGCGGTGCAA GAGATGTTAG GCCATGCCAA TTTGTCGACG ACCCAGATCT ATACCAAGCT CGATTTGCAG CATTTAGCCA CGGTGTACGA CAAAGCGCAT CCCCGAGCCA AGAAAAAACC TTAG
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Protein sequence | MSDYQRFIKQ LKLENKSEHT ISNYQRDLMG LLVFYLGDYL EQPLDEKALK SDQAWAFLDQ FDDWQAIKLP VLQAFIAFRM QQGIAARSIA RQLSAIRAFY AFLIEQGRAN HNPAKGLKAP KQPKALPKSL DVDLTRQLLE QPLKTWQDVR DQAIFEILYS GGLRVSELVE LDLSPGLDGL ASGWVRVLGK GQKERDAPVG QPAQKALHRW LEIRSDYAQP GEQAVFVNRF GKRLGVRSIQ TQLDKRTLQA GLPTKMSPHR LRHACATHVL ESSGDLRAVQ EMLGHANLST TQIYTKLDLQ HLATVYDKAH PRAKKKP
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