Gene Tcr_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0403 
Symbol 
ID3761184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp454408 
End bp454800 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content50% 
IMG OID637785114 
Producthypothetical protein 
Protein accessionYP_390673 
Protein GI78484748 
COG category[S] Function unknown 
COG ID[COG3536] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.337193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCAA CTCCACAACC CACTGACATC AAGCTCAAGC AAGCCTCACG TCAGTTGGTG 
GTGACGTTTG ACACCGGAGA AACGTTTGAA CTGCCATGTG AGTACCTGCG AGTTTATTCA
CAGTCAGCCG AAGTGACTGG GCATGCGCCT GGACAAGAAG TGCTGCAGGT AGGCAAACGT
GCCGTCAACA TTGAAGCCAT CACCCCCGTC GGCAACTATG CCATCAAGCT GCATTTTGAT
GACGGGCATG ATTCAGGCAT TTATACCTGG GAATGGCTCT ATAAGCTCGG CAAACACCAA
ACGGCTTATT GGCAAGACTA TTTAAAACGC TTGCAACTGG CCGGGCACAA ACACCCGGAT
ATTGAACCAA CCGACTTAAC CCAATTACTG TAA
 
Protein sequence
MASTPQPTDI KLKQASRQLV VTFDTGETFE LPCEYLRVYS QSAEVTGHAP GQEVLQVGKR 
AVNIEAITPV GNYAIKLHFD DGHDSGIYTW EWLYKLGKHQ TAYWQDYLKR LQLAGHKHPD
IEPTDLTQLL