Gene Tcr_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0401 
Symbol 
ID3760918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp452965 
End bp453585 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content44% 
IMG OID637785112 
Producthypothetical protein 
Protein accessionYP_390671 
Protein GI78484746 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.71715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACGT CAGAAAATTC ACCAGGCCTG GTCAAAACAT CGTTATCCAA GTTCTTTGAA 
ACACTGCTTA ATCAAGCGAT TCAACTGGAC GATCAACAAG GCCAAGCTTT TTCCCCGTGT 
GATGAAAAGG TCATTCAACT GACATTGACA GATTTGGCAC AAACGTTTTT TCTGATCTAT 
CAAATTCAAC CGGATGGGCA AGGCTCCTTC AGTGTTCAGA ACCATTTAAT GGGCAGTCCG 
GACTGCCACC TCAAGTTTTC TTGTAACGAT TGGATTCAAA ACCAACCAGC TTACAATATT 
TCAGGCGATG AAACCGTAGC CGAAGCGTTT ATTGAAGCCG TGAAAACCTT AGAAATCGAT 
TGGGAAGAAC AACTGTCTAA AGTAACCGGC GATTTAATCG CCTTCAAAGT CGGTTCTACA 
GTTCGACAAG GTCAAAAAAC ATCGCGGGAA GCCAAACAAA AAATCGGCGA AACACTCAAA 
GAATACTTAC AGTTTGAAAT AGAGGTTCTG CCGACCCACT CACAAATCAA CCGATTTGCG 
CACAATGTAC AGCAAACCAC CCAAGCGGTG GACCAACTGG CTGAACGCAT TCAACGTCTG 
CAAAACACTT CTTCCACTTA A
 
Protein sequence
MDTSENSPGL VKTSLSKFFE TLLNQAIQLD DQQGQAFSPC DEKVIQLTLT DLAQTFFLIY 
QIQPDGQGSF SVQNHLMGSP DCHLKFSCND WIQNQPAYNI SGDETVAEAF IEAVKTLEID 
WEEQLSKVTG DLIAFKVGST VRQGQKTSRE AKQKIGETLK EYLQFEIEVL PTHSQINRFA 
HNVQQTTQAV DQLAERIQRL QNTSST