| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0380 |
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| Symbol | |
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| ID | 3762327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 430417 |
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| End bp | 431166 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637785089 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_390650 |
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| Protein GI | 78484725 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCTT CAGACACATT AACCCATGTT TACGATATTA TTTCTGAAGG TATTTGGGAT
TGGCATTGCT CAACGGGCTA TGTTTATCGT AGTCCAGGTT GGTATCGGAT GCTCGGTTAC
GAAGTTGACT GTTTTGAAAA AAATGTTAAT ACTTGGGAAG AAGTGATTCA CCCTGATGAT
TATGCCAATG TGATGCAGCA TTTTGAAGAT TATATTCAGG GCCGTTCGGA AGAGTATAGA
ATCCAATATC GTTGTAAAAA AGCCGATAAA ACCTATCTCT GGATTGAGGA TTATGCCAAA
ATTGTTGAGC GATCAAACGA CGGCCGGCCA TTGCGTGTTA TTGGCGCGCA CAATAATATT
GATGAAGTAA AGCTCGCTCA AGAAGCTTTA AAACAACAAA ATCATTTGTT AAAAAATACC
AATGCCTCAC TTGAAGAACA AATCCATGAG CGGACAGAGC AGTTGATGCT TCTCAATCAG
CGCTTAGAAG AAAAAATAGA ACAGGCTCAG TTTCATGCGT GTCATGATGG GTTAACAGAA
TTGTTTAACA GGCGGAGTTT TGAAGAAAAA CTCTCGCAAG AGATTAAGCG TTCACGACGG
TATTCTCAAC CCATGAGCCT GATTTTATTG GATATCGATG ACTTTAAAAT CATTAATGAT
GAATACGGTC ATAAAGTGGG GGACCAAGTT CTCTGCGAGC TGGCCGTTTT TATCTTACAG
CATGTCAGGG AGTTTGATGT GGTTGCTTGA
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| Protein sequence | MDASDTLTHV YDIISEGIWD WHCSTGYVYR SPGWYRMLGY EVDCFEKNVN TWEEVIHPDD
YANVMQHFED YIQGRSEEYR IQYRCKKADK TYLWIEDYAK IVERSNDGRP LRVIGAHNNI
DEVKLAQEAL KQQNHLLKNT NASLEEQIHE RTEQLMLLNQ RLEEKIEQAQ FHACHDGLTE
LFNRRSFEEK LSQEIKRSRR YSQPMSLILL DIDDFKIIND EYGHKVGDQV LCELAVFILQ
HVREFDVVA
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