Gene Tcr_0370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0370 
Symbol 
ID3762317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp419148 
End bp420437 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content43% 
IMG OID637785079 
Producthypothetical protein 
Protein accessionYP_390640 
Protein GI78484715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAT GTATGACCAT TACCTGCCAG ATGTGTGAAC AGGACACCGA CTGTCGTATT 
GGTTACTCGA ATCGGAGAAT CCAGCCTCTT GCGTTTGCTT GTCCTCATTG TGAATCACAA
CTGGGGATTA CTCTCGACAT TTCCCATGCT CCAGAGTCTG GGTTTACTTT TGATGGGTGT
GAACCATCAA AGCGTCAATC CGATAAGCTA TTTTCCGAGC GTAACACCTT TCTTGACCTA
CACCTAGATT TTCCAGTGCG TACTGGAAAA TACCAGCCGG GGCGAACTCC TTATCTAATG
GCGAAGGAAG ATCTCAAGGT AGCGGCTGAT GGCGATTTCC AAAAAGCTCA TGCGATGTTC
GAGTTTCACA GTCATCATCT CGATGCACTT AACGGTATAG CCGAGAAGGC TGGTGATATA
AAAAGGTTAA TAAACCTTTA TCATGGAGCA AACAAACAAC TGTTTCAACG CCGAGCATCA
GATTTCCTAG GTAGACCTGA AGATAAGTCA CTGCTACCGC AAGACCTTAA TGCCACCCTC
TACTCCGTAA TATCCGTTGC ATTTTACCCG TTCACCGTGT TTGCCCATAG TAAAGAAATT
TCAGAAGAAA TGCCTAATCT TATGCAAGGT ATTGATTCGG TAAAATTGGA AGAATTTATC
CAGAACCTTG ATGTCACTGG TTTTTTGATG GGTCTCCAGA GAGACTGTCT CAATATCTAT
CCAAGAATCC TCGATGCTGA ATTGCCGTTG AGGTCTGCCT TATTCCTTGA TCTAACCGGT
AACACGAAAG TGGAAAAAAC CGCAACGCGT ATCTCAACTC AAGATTTCTC TGGTCTCAAG
GACCTATACA AAGACATCGT TGAGATATTG AGTCGTCAGC TTATTTTGGT GGCGGGTATC
AACAATCTTC TACATAGAGG AGATTTTAAT AGCTTTAAAG CTATTGACGG AGGTGTCCTT
CAAGACTTGC TCAAGTACTC AGGAAAAGTA CTTTCAGATA AATTTAAGTA TTTAGATGAC
TGTTGGTACA GATTGGATAT GAATGCCTTC AATCTAAGTC TGCGGAATGC CATAGCTCAC
CATAATGTGC GTTACACAGC TGTAGATCAA GTTGTCACCT ACACACCTCG TGGTGGTCGG
CTTGAGCAAG GAGAAGATGA GACCATGAGT TTGTTGGAGT TTACGCGGAT CTTGCTAATT
GCCTTTCGGG AGATGCATAG CCTTCACCAT GTCATCAAAA GTTTGTTGTA TTACAAATAC
CTGATCTATG ACAAAGGTGC TGGTATGTGA
 
Protein sequence
MNSCMTITCQ MCEQDTDCRI GYSNRRIQPL AFACPHCESQ LGITLDISHA PESGFTFDGC 
EPSKRQSDKL FSERNTFLDL HLDFPVRTGK YQPGRTPYLM AKEDLKVAAD GDFQKAHAMF
EFHSHHLDAL NGIAEKAGDI KRLINLYHGA NKQLFQRRAS DFLGRPEDKS LLPQDLNATL
YSVISVAFYP FTVFAHSKEI SEEMPNLMQG IDSVKLEEFI QNLDVTGFLM GLQRDCLNIY
PRILDAELPL RSALFLDLTG NTKVEKTATR ISTQDFSGLK DLYKDIVEIL SRQLILVAGI
NNLLHRGDFN SFKAIDGGVL QDLLKYSGKV LSDKFKYLDD CWYRLDMNAF NLSLRNAIAH
HNVRYTAVDQ VVTYTPRGGR LEQGEDETMS LLEFTRILLI AFREMHSLHH VIKSLLYYKY
LIYDKGAGM