Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0366 |
Symbol | |
ID | 3762352 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 416071 |
End bp | 416859 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637785075 |
Product | hypothetical protein |
Protein accession | YP_390636 |
Protein GI | 78484711 |
COG category | [S] Function unknown |
COG ID | [COG4916] Uncharacterized protein containing a TIR (Toll-Interleukin 1-resistance) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGCTT ATGATGTAGT TATTTCTTTT GCAGGCGAGG ATCGAGCGGT AGCAGAGTCA ATCGCTTCCA ATCTCGTCAC TAGGGGGATC AATGTCTTCT ATGACGAGTA TGAAAAAGCA AATTTATGGG GGAAAGATCT CTATGTACAC CTAACGAAGA TCTATAGGGA TGACTCTAAA TTTTGCTTGA TGGTAATTTC AGAAGATTAT GTAAAGAAAC AATGGACCAA CCATGAAAGA AAAGCTGCTC AAGCCAGAGC TTTCAATGAA AACAGGGAAT ACATCCTGCC TTTAAGATTA GATGATGCGG AGATAGATGG AATTTTAGGA ACGACGGGGT ACATAGATTA CCGGAATACT TCTGTAGACC ACATCATTGA TCTCCTTACT GAAAAAGTAA TCCAATACAA CAAAGAAAAT GGTATAGCCT ACAAAATCGT AAAAGCTGAA ACAGTCTTCC AGCAAGCCAT AGACTTCAAA GGTAATAGTG CATTTCGTGA CAGCGACATG AATACTGAAT GTCCTGCTTG TTGTACTCAA CAAAAGCTTT CCGAAGCTAC ATTATCTCTT GATGGAGATG ACACAATTTA TACTTGCAAA AATGGTTGCC AGCCATTGGT CGTAATTAGT CGACCTGGTA TAGTTGCTTG GCCTGGCAGG GGGGTTCGGC TGCAAGATTA CGTAATCCGA AATGTCAGAG AGATTACGAT TAAAACTGAA AGTATGGGTA TGCCAATGCT TATTCCTGCA AGCAAGGCTG CGCTTATGAA GATGAGGTCA AGCAGATAA
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Protein sequence | MPAYDVVISF AGEDRAVAES IASNLVTRGI NVFYDEYEKA NLWGKDLYVH LTKIYRDDSK FCLMVISEDY VKKQWTNHER KAAQARAFNE NREYILPLRL DDAEIDGILG TTGYIDYRNT SVDHIIDLLT EKVIQYNKEN GIAYKIVKAE TVFQQAIDFK GNSAFRDSDM NTECPACCTQ QKLSEATLSL DGDDTIYTCK NGCQPLVVIS RPGIVAWPGR GVRLQDYVIR NVREITIKTE SMGMPMLIPA SKAALMKMRS SR
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