Gene Tcr_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0366 
Symbol 
ID3762352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp416071 
End bp416859 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content41% 
IMG OID637785075 
Producthypothetical protein 
Protein accessionYP_390636 
Protein GI78484711 
COG category[S] Function unknown 
COG ID[COG4916] Uncharacterized protein containing a TIR (Toll-Interleukin 1-resistance) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCTT ATGATGTAGT TATTTCTTTT GCAGGCGAGG ATCGAGCGGT AGCAGAGTCA 
ATCGCTTCCA ATCTCGTCAC TAGGGGGATC AATGTCTTCT ATGACGAGTA TGAAAAAGCA
AATTTATGGG GGAAAGATCT CTATGTACAC CTAACGAAGA TCTATAGGGA TGACTCTAAA
TTTTGCTTGA TGGTAATTTC AGAAGATTAT GTAAAGAAAC AATGGACCAA CCATGAAAGA
AAAGCTGCTC AAGCCAGAGC TTTCAATGAA AACAGGGAAT ACATCCTGCC TTTAAGATTA
GATGATGCGG AGATAGATGG AATTTTAGGA ACGACGGGGT ACATAGATTA CCGGAATACT
TCTGTAGACC ACATCATTGA TCTCCTTACT GAAAAAGTAA TCCAATACAA CAAAGAAAAT
GGTATAGCCT ACAAAATCGT AAAAGCTGAA ACAGTCTTCC AGCAAGCCAT AGACTTCAAA
GGTAATAGTG CATTTCGTGA CAGCGACATG AATACTGAAT GTCCTGCTTG TTGTACTCAA
CAAAAGCTTT CCGAAGCTAC ATTATCTCTT GATGGAGATG ACACAATTTA TACTTGCAAA
AATGGTTGCC AGCCATTGGT CGTAATTAGT CGACCTGGTA TAGTTGCTTG GCCTGGCAGG
GGGGTTCGGC TGCAAGATTA CGTAATCCGA AATGTCAGAG AGATTACGAT TAAAACTGAA
AGTATGGGTA TGCCAATGCT TATTCCTGCA AGCAAGGCTG CGCTTATGAA GATGAGGTCA
AGCAGATAA
 
Protein sequence
MPAYDVVISF AGEDRAVAES IASNLVTRGI NVFYDEYEKA NLWGKDLYVH LTKIYRDDSK 
FCLMVISEDY VKKQWTNHER KAAQARAFNE NREYILPLRL DDAEIDGILG TTGYIDYRNT
SVDHIIDLLT EKVIQYNKEN GIAYKIVKAE TVFQQAIDFK GNSAFRDSDM NTECPACCTQ
QKLSEATLSL DGDDTIYTCK NGCQPLVVIS RPGIVAWPGR GVRLQDYVIR NVREITIKTE
SMGMPMLIPA SKAALMKMRS SR