Gene Tcr_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0365 
Symbol 
ID3762351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp414483 
End bp415865 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content31% 
IMG OID637785074 
Producthypothetical protein 
Protein accessionYP_390635 
Protein GI78484710 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.944034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGACA TACCACTACT GTTATTTAAT GATGGGCAAA AAATAAATGA GTCTTTGACT 
GACTACGTAA ATAGGATTGC TTTTCATAAC GGTTTTGATA GTTCAGAGGC AATGATTAAT
GCTTTTTTAG GTATAGATGT ATTCAAAGCA GAGTTTTTAA GATTGCAAGG TAAAGTGGGG
GTAGAAGAGT CAATTCCTTC TTTTGGGCTA ATTGGTTCAA ATCAGGGTGG TTTAAATGAA
AAAAGATTTT GGTTTAAGAA ACATGGATTT AGTTGGAATG ATCTTAAGTT ATTTATTGAG
CTAACAACTA CAAAAAAAAG TAAGCCAAAT TCATTTCCTA GGAAAAACTA TTCTCACTCT
CAATTTCGTT TGACCGATAG TAAAAAATCT TTAAAAAGAA AGATTTGTTT GAAGTGTTGG
GAAGACGGTA GATATATTAG ATTTTATTGG AATTTTGAGG ATTATAACTA CTGTCATCAT
CATAAGTGCA TGATGATTGA CTATGATGTT GAAAAATCGA TAATCGTAGA TGATCAGCCA
AGTCGAAAGA AATCTATATT TTTTGAAAAC CTATTTGATT GGTTAGAAGA AAATCATGGC
CAAGATTTAA ACTTCAACTT TATAGAAAAA GAAATATTTC AATTTCGACA GGATTTTTTT
TTAGCTGAGT TTTTAGAGAC GTTTTTCGAT CTCGTATTTT CGTTACCTTT GAATTTCAAA
GCTGTTGAAG ATTTATTACT TAGCTGTCAG TTGGTGAATG CACCACCTGA TGAACGAATC
AGAAAAATAG TATCTACCCT GTCTGGCCGA GATAAAATGA TAGCAAACAA GGTATGGTGC
TTGTGTGTTT TCTTGTATTT TATTGATACT AGTGATTATA TCGATGACTA CCAATACTGT
TATTTTGCCA GATTATTTAG CTTCGCCAAA GGTGTAAATC TTTCTTATTA TCGAGAATAT
TTCTGGAAGA TAGTTTTTAA ATCAGAATTG TTCTTTGATC TAGTGGATTT TGTTAGAGAG
AATCATTTTC GGCTATTTAA AATTGAATAC ATCAAGCTTA ATGATGACTT GAATATACCA
GATTTTATTG AAGTAAAGCG CTTGAAGTTT GATAGCCTGG ATATCGAATT TTTATTTTCT
TTAGAGTGTT TTCAGTTCTT GTCGCAGTCT GAAATTGATT TGAATATTGA TAAACTACTT
GAGAAATCTC CTAAAGGAGA GATTAGAACC GATTTTTTTT GGTTTAGACC TATACCTGAA
GAAAAAAAGT TATTAAAAAA GGTAGTTGTC AAAGTGATGG AGCGCATGGT TGCTAATATT
TTTATTAAAA TTTCGAATGT GGAAATTTTT TTGCCAGAAA AACTCCATAT GAGAAGTCAT
TGA
 
Protein sequence
MSDIPLLLFN DGQKINESLT DYVNRIAFHN GFDSSEAMIN AFLGIDVFKA EFLRLQGKVG 
VEESIPSFGL IGSNQGGLNE KRFWFKKHGF SWNDLKLFIE LTTTKKSKPN SFPRKNYSHS
QFRLTDSKKS LKRKICLKCW EDGRYIRFYW NFEDYNYCHH HKCMMIDYDV EKSIIVDDQP
SRKKSIFFEN LFDWLEENHG QDLNFNFIEK EIFQFRQDFF LAEFLETFFD LVFSLPLNFK
AVEDLLLSCQ LVNAPPDERI RKIVSTLSGR DKMIANKVWC LCVFLYFIDT SDYIDDYQYC
YFARLFSFAK GVNLSYYREY FWKIVFKSEL FFDLVDFVRE NHFRLFKIEY IKLNDDLNIP
DFIEVKRLKF DSLDIEFLFS LECFQFLSQS EIDLNIDKLL EKSPKGEIRT DFFWFRPIPE
EKKLLKKVVV KVMERMVANI FIKISNVEIF LPEKLHMRSH