Gene Tcr_0363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0363 
Symbol 
ID3762349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand- 
Start bp411663 
End bp412313 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content46% 
IMG OID637785072 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_390633 
Protein GI78484708 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.138758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAATA GAGATTATCA CGCTGAAAGA CGTGAATATG GATTTGCCGC TCTAAGACGA 
GCAGACTTGC AAACCGACCC GTTTCACCAG TTTTCTGACT GGATGGAAAC CGCGCTTGAA 
AAAACACAAC AAGATGCCAC CGCCATGAGC GTTTCAACCG TCAGTGCGGA TGGACAACCG 
CATAGTCGCA TTGTGTTATT AAAAACATTC AATTCAGACG GATTTATTTT TTATACACAC 
TATGACAGCG ATAAAGGCCA ACAAATCGAT CAAAATGCCA AAGCGGCTTT ATTGTTCTTC 
TGGCCAGAAC TGGATCGACA AATTCGAATT GAAGGTTCTC TGCAAAAAGT GCCTCGTGAA 
ACCTCGGAAG CCTATTTTCA CAGTCGCCCA AAAGACAGCC AGCTTGCAGC TTCCATCTCC 
AACCAGAGTC AACCGGTTGC CAGCCGAGAT ATTTTAGAAG CCAAACTGCA AGAAGCCATG 
TCACTGCCCG ATCGGAATTT AACCTGCCCG GCTCACTGGG GAGGCTATCA ACTTAAACCG 
TGTTATTTTG AGTTTTGGCA AGGGCGTCCC AGCCGATTAC ATGATCGTTT TCGCTATCAA 
CGTCTTTCAA AAAACGACCA GGCCTGGCAA ATTACTCGGT TAAACCCTTA A
 
Protein sequence
MPNRDYHAER REYGFAALRR ADLQTDPFHQ FSDWMETALE KTQQDATAMS VSTVSADGQP 
HSRIVLLKTF NSDGFIFYTH YDSDKGQQID QNAKAALLFF WPELDRQIRI EGSLQKVPRE 
TSEAYFHSRP KDSQLAASIS NQSQPVASRD ILEAKLQEAM SLPDRNLTCP AHWGGYQLKP 
CYFEFWQGRP SRLHDRFRYQ RLSKNDQAWQ ITRLNP