Gene Tcr_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0350 
Symbol 
ID3762336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp398157 
End bp399332 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content45% 
IMG OID637785059 
Productcitrate synthase 
Protein accessionYP_390620 
Protein GI78484695 
COG category[C] Energy production and conversion 
COG ID[COG0372] Citrate synthase 
TIGRFAM ID[TIGR01800] 2-methylcitrate synthase/citrate synthase II 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATATA TTCCTGGTTT AGCAGGTGTG CCTGCAACAG AGTCTGAAAT CTCCTATATT 
GATGGTAATA AAGGGGTTTT GACATATCGC GGTTATGACA TTATGGAGCT GGCGGAATAT
TCTTCTTTTG AAGAAACCAC GCTGCTGCTT TTGTTCGGCA ATTTGCCAAC GGCGGATGAG
TTAGCAGACT TTGAAAATAA ACTTCGTAAT GCACGTCGGG TTAAATATAA CTTGAGAGAA
ATTATGAAGA ACTTGCCGGC CACCACGCAT CCAATGCACA TGTTGCAAGT AGCGGTCGCG
AGTTTGGCGA GTTTCTACCC GAGTACGGAA TATATGAAGG GTGGTACGGA AAACCAGGAA
TACATTAACG AAGTGACGGT GAACATCATT TCGCATATGG GAACGCTCGT GGCCATGTGG
GAACACATGC GTAATGGGTT TGATCCGATT GAGCCGCGTA AAGACCTGAC CTACGCCGAA
AACTTTTTAT ATATGGTAAC GGGTGAAGAG CCTGATAAAG ATTGGGCAAG GCTGTTAGAT
GCCTGTCTGA TCTTGCATGC TGAACACACC ATTAATGCCT CAACGTTTAC CACGATGGTA
ACGGGGTCGA CGTTAGCCAA TCCGTGTTCT GTTATTTCTT CGGCGATTGC TTCGTTATCC
GGCCCATTGC ATGGTGGAGC CAATCAAAAA GTGATTGAAA TGCTGGACGA AATCGGTACG
CCTGAAAATG CGCGTCCTTA TATTGAAAAG CGCTTGGCAG AGAAGAAAGT GATTTGGGGG
ATGGGGCATC GTGAATATAA AACGAAAGAT CCTCGTGCCA CAATTCTACA AAAATTGTCT
TCGGAGTTAT TGCAAAATAA AAGTGACGCC GGTTCTCTGA GTAAAGCGTT TGAAACGGCG
ATGGAAGTTG AGCGTGTTTG TGAAGAGCTG CTCGGGCATA AAGGGGTGTA CCCGAATGTC
GATTTTTATT CAGGTATTTT GTATAAAGAA ATGGGCTTTG ATGCGGGCTT GTTTACCCCG
ATTTTTGCGG TAGCCCGTTC TGCCGGCTGG ATGGCGCATT GGCGTGAACA GTTGCAAAAC
AATAAGATCT TCCGACCGAC TCAAATCTAC ACAGGGGCGG GTAACTCTTG CTATTTGCCA
ATGGAAAAAA GAAGTCAGAA GAAATCCATG CCATAG
 
Protein sequence
MEYIPGLAGV PATESEISYI DGNKGVLTYR GYDIMELAEY SSFEETTLLL LFGNLPTADE 
LADFENKLRN ARRVKYNLRE IMKNLPATTH PMHMLQVAVA SLASFYPSTE YMKGGTENQE
YINEVTVNII SHMGTLVAMW EHMRNGFDPI EPRKDLTYAE NFLYMVTGEE PDKDWARLLD
ACLILHAEHT INASTFTTMV TGSTLANPCS VISSAIASLS GPLHGGANQK VIEMLDEIGT
PENARPYIEK RLAEKKVIWG MGHREYKTKD PRATILQKLS SELLQNKSDA GSLSKAFETA
MEVERVCEEL LGHKGVYPNV DFYSGILYKE MGFDAGLFTP IFAVARSAGW MAHWREQLQN
NKIFRPTQIY TGAGNSCYLP MEKRSQKKSM P