| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0326 |
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| Symbol | |
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| ID | 3762548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 366044 |
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| End bp | 367432 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637785035 |
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| Product | major facilitator transporter |
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| Protein accession | YP_390596 |
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| Protein GI | 78484671 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000804058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAA TCAGTCGTAG TATGGCGCCT ATTGAACGAC GTGCCGCTTT CTCAGTCGCA
GGTATTTTTT CGACTCGCAT GCTCGGTCTG TTTATGATTT TCCCCGTGTT TGCCTTGTTT
GCGCACGAAG AGTTTCAAGG CGTGACCGCC ACCCAAATTG GGATTGCAAT GGGAATTTAC
GGATTAACAC AAGCCGTGTT GCAGATTCCT TATGGCATGC TGTCGGACCG TTTTGGCCGT
AAGCCACTGA TTATTGTCGG GATGCTGGTC TTTATGCTCG GGTCTATTGT GTGCGCGATG
GCCGACTCCA TTGAAATGAT GATTGTCGGT CGTGCCATTC AAGGGATGGG CGCTGTAGCG
GCGGTGCTAA TGGCCACCGT GGCGGATTTG GTGACGGAAC AGTTTCGTTT AAGAGCCATG
TCGATTGTCG GCATGACGAT TGGTTTATCG TTTACCCTTT CGCTGGTGGT TGGCCCAATG
CTGGGCGAGT TGTTTGGTGT CAGAGGTATT TTTTGGGTGA TTGCAGGCCT GGGCGTTTTA
GGCATTGTTT TGGTGTTGTT CGCTGTGCCG AAAATTGAGA ACCAAACCTT TCAGCGTGAA
GCGGAAGCGG ATCCCAGTCA GTTTAAAGAT GTGATTAAAA ACCCGCAATT GCTTCGTTTG
GACATTGGGG TGTTTGTGTT GCACGCCATA CTGACGGCGA TGTTTATTGC GATTCCGTTT
ATGATTCGAG ATAACGCCGG TCTGGATTCC CTTCACCATT GGGAACTGTA TTTGCCGGTG
ATGTTGTTGT CATTCGTTTT AATGGTGCCG TTTATTATTC AAGCCGAATC GAAAGGGCGT
ATGAAACCGA TTTTTGTCGG TGCGATTTTA ACCATCGCGT TAATGCAGCT TGGTTTTTTA
TTTGAAGCGA ATGGCTTCTG GACGATGTTC GTTTTGTTGC TGATCTTTTT TACCGCCTTT
AATTTATTAG AAGCGTCGTT ACCTTCTTTG GTCGTGAAGC TTTCGCCGGC AGACAAAAAA
GGCACGGCAA GCGGTGTGTA TTCCAGCAGT CAGTTTTTAG GAGCGGCTTC TGGCGGGTTT
ATCGGTGGTT GGTTCTATGA AATGTACGGT CTCGAAGGGC TGTTTTTCTT TACCGCAAGC
ATTGGGTTTG TTTGGTTTTT AATCGCGATG AGTATGTCGA AGCCTCTTCC TTTAAGCATT
GCCTCCGTTC ACTACACGAC TGAGCTGGAT GAAACCGAAA AACAGCAGTT AACCGAAAAG
TTATTGTCCT ATGACGGCAT TTATGAAGTG GTCTTTTTAT TGGATGAACA CCGAGTGTTC
TTTAAGATTG ACCGCAAGGT GATTGATGAA GTCGGCTTGA TTGATTATCT TGAAAGAGGG
TTGGCGTAA
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| Protein sequence | MSEISRSMAP IERRAAFSVA GIFSTRMLGL FMIFPVFALF AHEEFQGVTA TQIGIAMGIY
GLTQAVLQIP YGMLSDRFGR KPLIIVGMLV FMLGSIVCAM ADSIEMMIVG RAIQGMGAVA
AVLMATVADL VTEQFRLRAM SIVGMTIGLS FTLSLVVGPM LGELFGVRGI FWVIAGLGVL
GIVLVLFAVP KIENQTFQRE AEADPSQFKD VIKNPQLLRL DIGVFVLHAI LTAMFIAIPF
MIRDNAGLDS LHHWELYLPV MLLSFVLMVP FIIQAESKGR MKPIFVGAIL TIALMQLGFL
FEANGFWTMF VLLLIFFTAF NLLEASLPSL VVKLSPADKK GTASGVYSSS QFLGAASGGF
IGGWFYEMYG LEGLFFFTAS IGFVWFLIAM SMSKPLPLSI ASVHYTTELD ETEKQQLTEK
LLSYDGIYEV VFLLDEHRVF FKIDRKVIDE VGLIDYLERG LA
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