Gene Tcr_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0316 
SymbolrpsM 
ID3762538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp357074 
End bp357430 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content40% 
IMG OID637785025 
Product30S ribosomal protein S13 
Protein accessionYP_390586 
Protein GI78484661 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0714162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCGTA TTGCCGGCGT AAACATTCCA GTAAATAAAC ATATTGTTAT TGGATTAAGA 
TCGATCTACG GGGTTGGACA AACGACAGCT CAAAAAATTT GTGCAGATGT GAATATTGAT
CCAACAACGA AAGTTCGTGA ACTAACTGAA GAACAGTTAG AAGCACTTCG TTCAGAAGTT
ACAAAGTTTA AGATTGAAGG TGATCTTCGT CGTGACGTTA CTATGAACAT CAAGCGTTTG
ATGGATATGG GGTGTTACCG AGGAATTCGC CATCGTCGTA GCCTTCCTTT AAGAGGGCAA
CGCACAAAAA ATAATGCTCG TACTCGTAAG GGTCCTAAAA AACCTATTAA GCGTTAA
 
Protein sequence
MARIAGVNIP VNKHIVIGLR SIYGVGQTTA QKICADVNID PTTKVRELTE EQLEALRSEV 
TKFKIEGDLR RDVTMNIKRL MDMGCYRGIR HRRSLPLRGQ RTKNNARTRK GPKKPIKR