| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0315 |
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| Symbol | secY |
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| ID | 3762537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 355662 |
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| End bp | 356975 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637785024 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_390585 |
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| Protein GI | 78484660 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0598799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAGTC AGTCAATTGA AAATTCAGGC ACAGGTGGGT TAAGCCAAAA AATATTTTTT
GTCTTAGGTG CGTTAATTGT TTACCGTTTA GGAACTCATA TTCCTGTTCC TTTGATTGAC
CCAGTTGCGC TGGCTGCTAT GTTTGAACAG CAAAAGGGTA CGATCCTGGA CATGTTCAAC
ATGTTCTCCG GTGGTGCTCT TCAAAGACTT TCTATTTTGG CGCTGGGGAT TATGCCGTAT
ATTTCTGCCT CTATCATTAT GCAGTTATTA ACGGTTGTAT CTCCAACCCT TGAGCAGTTA
AAGAAAGACG GTGAAGCTGG TCGAAGAAAA ATTACTCAAT ACACACGTTA TGGAACTGTT
GTTCTTGCAA CATTTCAGGC ATTAGGCGTG GCAATTGCAC TAGAATCCCA GAACATTAAT
GGGATGTCTG TCGTTGTTGA GCCAGGTTTG TTGTTTAAGG TTATTGCTGT CGCCACCTTG
GTGAGCGGAA CAATTTTCTT AATGTGGTTA GGTGAGCAGA TCACCGAAAG AGGTATTGGA
AACGGTATTT CTTTAATTAT TTTTGCAGGT ATTGTAGCAG GTTTACCTTC TGCACTTGGC
GGCACGTTTG AGCAAGTCAA TACTGGCGCG ATGCATGCGA TAACTGCTTT TGTGTTATTG
GCATTGGTGT TTTTGGTTAT TGCGTTCGTT GTCTTTGTTG AAAGAGGCCA ACGTCGTATT
CCAATTCACT ACGCTCAACG CATGCGTGGT CGTAAGTTGT ATGGCGGTCA AGAAGGCCAT
TTGCCATTGA AGTTGAATAT GGCGGGTGTT ATTCCTCCTA TTTTCGCTTC AAGCATTATT
CTATTCCCAG CAACACTTGG TGGATGGTTT GGTACTGCAG AAAATATGGG ATGGCTTAAA
GACATTGCAA CAACAATGTC GCCGGGTCAG CCTTTGTATA TTTTGTTTTA TGCAATGGCG
ATTATTTTCT TTTGTTTTTT CTATACAGCA ATTGTTTTCA ATCCAAATGA GACAGCTGAT
AACTTAAGAA AATCTGGTGC TTATATTCCA GGTATTCGCC CTGGTCAGCA AACAGCAAGA
AGAATTGATA CAATCATGAG TCGTTTAACA TTGGCAGGTG CAATTTATAT TACACTTGTT
TGTTTGTTAC CTGAGTTCTT GATTTTGTAT TGGAATGTTC CTTTTTATTT TGGTGGAACA
TCATTGCTGA TTATTGTTAT TGTGGTTATG GATTTTATGA CAAACATTCA AGCTCACATG
CAATCAGGTC AATACGAAAG TATGATGAAA AAAGCTAATT TAAAGGGTCG GTAA
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| Protein sequence | MNSQSIENSG TGGLSQKIFF VLGALIVYRL GTHIPVPLID PVALAAMFEQ QKGTILDMFN
MFSGGALQRL SILALGIMPY ISASIIMQLL TVVSPTLEQL KKDGEAGRRK ITQYTRYGTV
VLATFQALGV AIALESQNIN GMSVVVEPGL LFKVIAVATL VSGTIFLMWL GEQITERGIG
NGISLIIFAG IVAGLPSALG GTFEQVNTGA MHAITAFVLL ALVFLVIAFV VFVERGQRRI
PIHYAQRMRG RKLYGGQEGH LPLKLNMAGV IPPIFASSII LFPATLGGWF GTAENMGWLK
DIATTMSPGQ PLYILFYAMA IIFFCFFYTA IVFNPNETAD NLRKSGAYIP GIRPGQQTAR
RIDTIMSRLT LAGAIYITLV CLLPEFLILY WNVPFYFGGT SLLIIVIVVM DFMTNIQAHM
QSGQYESMMK KANLKGR
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