Gene Tcr_0309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0309 
Symbol 
ID3762531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp353199 
End bp353594 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content39% 
IMG OID637785018 
Productribosomal protein S8 
Protein accessionYP_390579 
Protein GI78484654 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.000138309 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATGT CTGATCCAAT AGCTGATATG CTAACTCGTA TTCGTAATGG TCAAATTGCT 
GGTCATTCGA ATGTTGTTAT GCCTTCATCA AAAGTTAAAG TTGCAGTAGC AAAAGTATTA
ACTGGTGAAG GGTATGTTAG TTCATACAGC GTAAGTGATA AGAATGGTAA GTCAGAGTTG
TCGGTTGATT TGAAGTATTT TGAAGGTCAA CCAGTCATTG AAATGCTTAA GCGTGTGAGC
CGTCCAGGTT TGCGTGTGTA TAAGAATAAA GATGAGTTAC CAAAAGTAAT CGGTGGTTTA
GGAGTTGCGG TAGTTTCAAC TTCTAAAGGA ATCATGTCTG ATCGTGATGC GCGCAAAGCG
GGTATCGGCG GTGAGATTAT TTGTTATATA GCTTAA
 
Protein sequence
MSMSDPIADM LTRIRNGQIA GHSNVVMPSS KVKVAVAKVL TGEGYVSSYS VSDKNGKSEL 
SVDLKYFEGQ PVIEMLKRVS RPGLRVYKNK DELPKVIGGL GVAVVSTSKG IMSDRDARKA
GIGGEIICYI A