Gene Tcr_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0301 
Symbol 
ID3762562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp349918 
End bp350604 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content40% 
IMG OID637785010 
Productribosomal protein S3 
Protein accessionYP_390571 
Protein GI78484646 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00276484 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTCAAA AAGTACATCC GATTGGGATC CGATTAGGGA TTACCAAAGA TTGGAATGCT 
CGCTGGTATG CGGATAGCAA AAACTATTCT GATTTCCTTA TCAGTGATAT CGAAATCCGA
AAAGAGTTAA ATGAAAAGCT AAAACATGCT TCAGTGAGCC AAATTAACAT CGAACGCGTT
GCAAACGGTG TTCGTGTTAC TATTCACACT GCCCGTCCAG GTGTTGTGAT TGGTAAAAAA
GGTGAAGATA TTGAGAAATT AAAGCAAGCT TTGATTGCTA AAACTGGCAT GCCGGTTAAT
ATCAATATTG AAGAAATCAA GAAGCCTGAG TTAGATGCTA AGTTGGTCGC TGAAGGAATT
GCACAGCAAT TAGAGAAGCG TATCCAATTC CGTCGTGCTA TGAAGCGTGC GGTAAGTAAT
GCGATGCGTT TAGGCGCGCA AGGTATTAAA GTAAATGTTT CTGGTCGTTT AAATGGTGCA
GAAATTGCAC GTGCTGAGTG GTATAGAGAA GGACGAGTTC CTCTTCATAC ACTTCGTGCC
GACATTGATT ATGCGACTTT CGAAGCAGAT ACCACTTACG GTAAAATTGG AGTTAAAGTT
TGGATCTTTA AAGGTGAAAA GCTAGAAAAA ATTTCAATGG TAAGTGATGA CAAGAAACAA
TCTAAAGGCA AGAAAGGCCG TAAATAA
 
Protein sequence
MGQKVHPIGI RLGITKDWNA RWYADSKNYS DFLISDIEIR KELNEKLKHA SVSQINIERV 
ANGVRVTIHT ARPGVVIGKK GEDIEKLKQA LIAKTGMPVN INIEEIKKPE LDAKLVAEGI
AQQLEKRIQF RRAMKRAVSN AMRLGAQGIK VNVSGRLNGA EIARAEWYRE GRVPLHTLRA
DIDYATFEAD TTYGKIGVKV WIFKGEKLEK ISMVSDDKKQ SKGKKGRK