Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0301 |
Symbol | |
ID | 3762562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 349918 |
End bp | 350604 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637785010 |
Product | ribosomal protein S3 |
Protein accession | YP_390571 |
Protein GI | 78484646 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00276484 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCAAA AAGTACATCC GATTGGGATC CGATTAGGGA TTACCAAAGA TTGGAATGCT CGCTGGTATG CGGATAGCAA AAACTATTCT GATTTCCTTA TCAGTGATAT CGAAATCCGA AAAGAGTTAA ATGAAAAGCT AAAACATGCT TCAGTGAGCC AAATTAACAT CGAACGCGTT GCAAACGGTG TTCGTGTTAC TATTCACACT GCCCGTCCAG GTGTTGTGAT TGGTAAAAAA GGTGAAGATA TTGAGAAATT AAAGCAAGCT TTGATTGCTA AAACTGGCAT GCCGGTTAAT ATCAATATTG AAGAAATCAA GAAGCCTGAG TTAGATGCTA AGTTGGTCGC TGAAGGAATT GCACAGCAAT TAGAGAAGCG TATCCAATTC CGTCGTGCTA TGAAGCGTGC GGTAAGTAAT GCGATGCGTT TAGGCGCGCA AGGTATTAAA GTAAATGTTT CTGGTCGTTT AAATGGTGCA GAAATTGCAC GTGCTGAGTG GTATAGAGAA GGACGAGTTC CTCTTCATAC ACTTCGTGCC GACATTGATT ATGCGACTTT CGAAGCAGAT ACCACTTACG GTAAAATTGG AGTTAAAGTT TGGATCTTTA AAGGTGAAAA GCTAGAAAAA ATTTCAATGG TAAGTGATGA CAAGAAACAA TCTAAAGGCA AGAAAGGCCG TAAATAA
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Protein sequence | MGQKVHPIGI RLGITKDWNA RWYADSKNYS DFLISDIEIR KELNEKLKHA SVSQINIERV ANGVRVTIHT ARPGVVIGKK GEDIEKLKQA LIAKTGMPVN INIEEIKKPE LDAKLVAEGI AQQLEKRIQF RRAMKRAVSN AMRLGAQGIK VNVSGRLNGA EIARAEWYRE GRVPLHTLRA DIDYATFEAD TTYGKIGVKV WIFKGEKLEK ISMVSDDKKQ SKGKKGRK
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