Gene Tcr_0296 details

Gene Information

• Locus tag: Tcr_0296
• ID: 3762557
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thiomicrospira crunogena XCL-2
• Kingdom: Bacteria
• Replicon accession: NC_007520
• Strand: +
• Start bp: 347526
• End bp: 348146
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637785005
• Product: ribosomal protein L4/L1e
• Protein accession: YP_390566
• Protein GI: 78484641
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000000000410441
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTAA AATTAATTGA ATTAGCAAGT GGAAAAGAAG CGGGATCCGT TAAAGTTTCA 
GAAGCCATTT TTGGTGCTGA ATTTAACGAA GCCCTTGTTC ATCAAGTTGT TAACGCCTAC 
TTAGCTGGTG CACGTTCTGG TACGAAAGGT CAGAAAAATC GTTCAGCAGT AAGAGGTGGT 
GGCGCAAAAC CTTGGGCTCA AAAAGGGTCT GGTCGTGCGC GTGCGGGTAC CAGTCGTGGT 
CCAATTTGGA TTGGTGGTGG ACGTGCATTC CCTGGGCACA ACCGTGACTT TTCACAGAAA 
GTAAATAAAA AAATGTACCG TGGAGCGATG AAAGCAATTT TTTCAGAGCT AGCCCGTACA 
GAAAGATTGG TAGTCGTTGA TGACTTTAAA GTAGAAGCAC CTAAGACGAA AGACTTTGTT 
GCTAAATTAA ATACTTTGAA CCTGAAAGAT GCTTTGGTTA TTACAGAAGG TTTTGATGAG 
TATTTATATT TATCAGCTCG CAATTTATAT CATGCTGATG TGTGTGATGT TGCCTCGATT 
GATCCTGTCA GTTTAGTAGG ATTTAAGTCG ATAGTAGTAA CGCAAGGTGC GATTAAGCAA 
CTTGAGGAGA AGCTAGCATG A 

 

Protein sequence

MDLKLIELAS GKEAGSVKVS EAIFGAEFNE ALVHQVVNAY LAGARSGTKG QKNRSAVRGG 
GAKPWAQKGS GRARAGTSRG PIWIGGGRAF PGHNRDFSQK VNKKMYRGAM KAIFSELART 
ERLVVVDDFK VEAPKTKDFV AKLNTLNLKD ALVITEGFDE YLYLSARNLY HADVCDVASI 
DPVSLVGFKS IVVTQGAIKQ LEEKLA