Gene Tcr_0295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0295 
Symbol 
ID3762556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp346877 
End bp347515 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content40% 
IMG OID637785004 
Productribosomal protein L3 
Protein accessionYP_390565 
Protein GI78484640 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000000000479422 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTATTG GTGTCATTGG TACCAAAGTT GGTATGACTC GTGTATTTAA CGAGGATGGT 
GTATCGACTC CTGTGACGGT GGTGGAAGTT TCACCAAACC GCATAACACA AATCAAAAAT 
AATGAAACTG ATGGTTATGA TGCTATTCAG GTTACTTTTG GTTCGAAGCA TGCTGGTCGT 
GTTTCAAAGC CTGAAGCTGG TCATTATGCG AAAGCTGGTG TAGAAGCTGG TCAAGGTTTG 
TGGGAGTTTA GATTAGATGA TGTTTCAGAA GTTGAAGGTT TAGAGCCTGG TTCTGAAATT 
ACAGTTGAAA AATTTAATGA TGTTGCAGTA GTTGATGTTT CTGGCACAAC GAAAGGTAAA 
GGTTTTCAAG GTGGTGTCAA AAGACATAAC TTTAAAATGC AAGATGCAAC TCATGGTAAC 
TCTGTTTCTC ACCGTGCACC TGGTTCAATT GGTCAAAACC AAACTCCTGG AAGAGTCTTC 
AAGGGGAAGA AAATGGCCGG TCATATGGGG AATGTAAAAC AAACAACACT TAATCTTGAG 
TTGGTTAAGG TTGATGTTGA AAATTCATTA CTGTTGATCA AAGGTGCTTT GCCTGGCGCA 
AAAGGTAGTA CCGTTATTGT TCGCAAGGCA ATTAAATAA
 
Protein sequence
MGIGVIGTKV GMTRVFNEDG VSTPVTVVEV SPNRITQIKN NETDGYDAIQ VTFGSKHAGR 
VSKPEAGHYA KAGVEAGQGL WEFRLDDVSE VEGLEPGSEI TVEKFNDVAV VDVSGTTKGK 
GFQGGVKRHN FKMQDATHGN SVSHRAPGSI GQNQTPGRVF KGKKMAGHMG NVKQTTLNLE 
LVKVDVENSL LLIKGALPGA KGSTVIVRKA IK