Gene Tcr_0293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0293 
Symbol 
ID3762554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp345179 
End bp346369 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content44% 
IMG OID637785002 
Productelongation factor Tu 
Protein accessionYP_390563 
Protein GI78484638 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000243398 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAG AAAAGTTTGA ACGTAGTAAG CCGCACGTAA ACGTTGGTAC GATTGGTCAC 
GTTGACCATG GTAAAACAAC TCTTACAGCG GCCCTAACAA TTGTACAAGG TAAGAAGTTT
GGTGGAGATT CAAAAGACTA CGCGTCAATT GATAACGCAC CAGAAGAGCG TGAGCGTGGT
ATCACAATCT CAACAGCACA CGTTGAGTAT GAATCAGAAA CACGTCACTA TGCGCACGTA
GACTGTCCAG GTCACGCCGA CTATGTGAAA AACATGATCA CAGGTGCGGC ACAGATGGAT
GGTGCGATCC TAGTATGTTC AGCTGCGGAT GGTCCAATGC CACAAACGCG TGAGCACATT
CTTCTATCTC GTCAGGTAGG TGTACCATAC ATCGTTGTTT ACCTAAACAA AGCTGACATG
GTTGATGATG AAGAACTACT AGAGCTAGTA GAAATGGAAG TTCGTGAACT TCTAGATACT
TATGATTTCC CAGGTGATGA TACGCCGGTA ATCATGGGGT CAGCTCTTAA AGCAATCGAA
GGTGATCAAT CAGAGATTGG TGAGCCATCA ATCGGTCGTC TAGTAGATGC TTTGGATTCA
TACATTCCAG AGCCAACACG TGAAACTGAC AAGCCATTCC TAATGCCTGT AGAAGACATC
TTCTCAATCC AAGGTCGTGG AACGGTAGCA ACAGGTCGTG TTGAAACAGG TGTTGTAAAA
GTTGGTGAAG AAATCGAAAT CGTCGGTATC CGTCCAACAA CAACAACAAC TGTTACAGGT
GTTGAAATGT TCCGTAAACT GCTTGATCAA GGTGAAGCAG GGGATAACGT AGGTATTCTA
TTACGTGGTA CTAAGCGTGA AGATATCGAA CGTGGTCAAG TACTTGCACA TAAAGGTACT
GTAACACCGC ATACTAAGTT CGAAGCAGAA GTGTATGTAT TATCAAAAGA TGAAGGTGGT
CGTCATACAC CATTCTTCCA AGGATATCGT CCACAGTTCT ACTTCCGTAC AACAGATGTG
ACAGGTGCAT GTGAACTGCC AGCAGGAACA GAAATGGTAA TGCCTGGTGA TAACGTGCAA
ATGACTGTAG AGTTGATCAA CCCGATCGCG ATGAACGAAG GTTTACGTTT TGCGATTCGT
GAAGGTGGAC GTACAGTTGG TGCGGGTGTT GTTGCTAAAA TTATTGATTA A
 
Protein sequence
MAKEKFERSK PHVNVGTIGH VDHGKTTLTA ALTIVQGKKF GGDSKDYASI DNAPEERERG 
ITISTAHVEY ESETRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLSRQVGVPY IVVYLNKADM VDDEELLELV EMEVRELLDT YDFPGDDTPV IMGSALKAIE
GDQSEIGEPS IGRLVDALDS YIPEPTRETD KPFLMPVEDI FSIQGRGTVA TGRVETGVVK
VGEEIEIVGI RPTTTTTVTG VEMFRKLLDQ GEAGDNVGIL LRGTKREDIE RGQVLAHKGT
VTPHTKFEAE VYVLSKDEGG RHTPFFQGYR PQFYFRTTDV TGACELPAGT EMVMPGDNVQ
MTVELINPIA MNEGLRFAIR EGGRTVGAGV VAKIID