| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0290 |
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| Symbol | rpsL |
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| ID | 3762551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 342074 |
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| End bp | 342448 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637784999 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_390560 |
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| Protein GI | 78484635 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000000638987 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTACTA TTAACCAGTT GGTGCGTAAG CCGCGTAAAG ATAAGATGAA AAAGTCAAAT
GTACCTGCAC TAGAGGCTTG TCCTCAACGT CGTGGAGTAT GTACGCGTGT TTATACAACA
ACCCCTAAAA AGCCTAACTC TGCCCTACGT AAAGTTGCAC GTGTACGTTT AACTAACGGA
TATGAAGTTT CTAGTTATAT CGGTGGTGAA GGTCACAACT TGCAAGAACA CTCCGTGATT
TTAATTCGCG GTGGTCGTGT AAAAGATTTA CCTGGTGTAC GTTATCATAC AGTTCGCGGT
TCTTTGGATT GCGCAGGTGT AGATGGTCGT AAACAAGGTC GTTCTAAGTA CGGTGCGAAG
CGTCCTAAGG GTTAA
|
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| Protein sequence | MATINQLVRK PRKDKMKKSN VPALEACPQR RGVCTRVYTT TPKKPNSALR KVARVRLTNG
YEVSSYIGGE GHNLQEHSVI LIRGGRVKDL PGVRYHTVRG SLDCAGVDGR KQGRSKYGAK
RPKG
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