| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0285 |
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| Symbol | |
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| ID | 3760667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 331681 |
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| End bp | 332376 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637784994 |
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| Product | ribosomal protein L1 |
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| Protein accession | YP_390555 |
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| Protein GI | 78484630 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000742644 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGAATGG CTAAGTTAAC AAAAAAACAA AAGATGTTTG CTGAGAAAGT TGATTCTCTA
AAGTCTTATG ACGCTCTTGA AGGTTTTTCT TTGGTTTCAG AATTAGCAAC AGCTAAGTTT
TCTGAATCAA TAGATGTTGC CATTAAGTTA GGTATCGATC CTCGTAAGTC TGACCAGGTT
GTGCGTGGTG CAACGGTTAT GCCAAATGGT ACGGGGAAAG ACGTGCGTGT TGCCGTGTTT
ACAGGTGATG CAAATGCAGC CGCTGCAAAA GAAGCCGGTG CTGAGTTTGT TGGGATGGAT
GATCTAGCAG CTGAAGTAAA AGGCGGCATG ATGGATTTTG ACGTTGTTAT TGCGTCTCCG
GATGCAATGA GAGTTGTAGG TATGTTAGGT CAGGTGTTGG GTCCTCGCGG ATTGATGCCA
AACCCTAAAA CTGGGACAGT TACACCAGAT GTTGTAACAG CAATTAAGAA TGCAAAATCA
GGACAAGTTC GATTCCGTGC TGATAAAGCT GGGATTGTTC ACGCGTCAAT CGGTAAGGTT
GATTTTGCCC CTGAAAAGTT AAAAGAAAAT TTAAATGCAT TGATTGAAGA CTTGAATAAA
GCTAAGCCAG CTGCTGCAAA AGGTACTTAT ATGAAAAAAG TATCTATTTC TAGCACAATG
GGGCCTGGTA TTGTTCTTGA TCAATCATCA TTGTAA
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| Protein sequence | MGMAKLTKKQ KMFAEKVDSL KSYDALEGFS LVSELATAKF SESIDVAIKL GIDPRKSDQV
VRGATVMPNG TGKDVRVAVF TGDANAAAAK EAGAEFVGMD DLAAEVKGGM MDFDVVIASP
DAMRVVGMLG QVLGPRGLMP NPKTGTVTPD VVTAIKNAKS GQVRFRADKA GIVHASIGKV
DFAPEKLKEN LNALIEDLNK AKPAAAKGTY MKKVSISSTM GPGIVLDQSS L
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